These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

159 related articles for article (PubMed ID: 30239607)

  • 1. CINNA: an R/CRAN package to decipher Central Informative Nodes in Network Analysis.
    Ashtiani M; Mirzaie M; Jafari M
    Bioinformatics; 2019 Apr; 35(8):1436-1437. PubMed ID: 30239607
    [TBL] [Abstract][Full Text] [Related]  

  • 2. wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool.
    Gysi DM; Voigt A; Fragoso TM; Almaas E; Nowick K
    BMC Bioinformatics; 2018 Oct; 19(1):392. PubMed ID: 30355288
    [TBL] [Abstract][Full Text] [Related]  

  • 3. linkcomm: an R package for the generation, visualization, and analysis of link communities in networks of arbitrary size and type.
    Kalinka AT; Tomancak P
    Bioinformatics; 2011 Jul; 27(14):2011-2. PubMed ID: 21596792
    [TBL] [Abstract][Full Text] [Related]  

  • 4. A systematic survey of centrality measures for protein-protein interaction networks.
    Ashtiani M; Salehzadeh-Yazdi A; Razaghi-Moghadam Z; Hennig H; Wolkenhauer O; Mirzaie M; Jafari M
    BMC Syst Biol; 2018 Jul; 12(1):80. PubMed ID: 30064421
    [TBL] [Abstract][Full Text] [Related]  

  • 5. MetaCycle: an integrated R package to evaluate periodicity in large scale data.
    Wu G; Anafi RC; Hughes ME; Kornacker K; Hogenesch JB
    Bioinformatics; 2016 Nov; 32(21):3351-3353. PubMed ID: 27378304
    [TBL] [Abstract][Full Text] [Related]  

  • 6. DiffSLC: A graph centrality method to detect essential proteins of a protein-protein interaction network.
    Mistry D; Wise RP; Dickerson JA
    PLoS One; 2017; 12(11):e0187091. PubMed ID: 29121073
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Spathial: an R package for the evolutionary analysis of biological data.
    Gardini E; Giorgi FM; Decherchi S; Cavalli A
    Bioinformatics; 2020 Nov; 36(17):4664-4667. PubMed ID: 32437522
    [TBL] [Abstract][Full Text] [Related]  

  • 8. CePa: an R package for finding significant pathways weighted by multiple network centralities.
    Gu Z; Wang J
    Bioinformatics; 2013 Mar; 29(5):658-60. PubMed ID: 23314125
    [TBL] [Abstract][Full Text] [Related]  

  • 9. RANKS: a flexible tool for node label ranking and classification in biological networks.
    Valentini G; Armano G; Frasca M; Lin J; Mesiti M; Re M
    Bioinformatics; 2016 Sep; 32(18):2872-4. PubMed ID: 27256314
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Molecular Network Analysis in Rabies Pathogenesis Using Cooperative Game Theory.
    Bostani R; Mirzaie M
    Iran J Biotechnol; 2020 Jul; 18(3):e2551. PubMed ID: 33850945
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Range-limited centrality measures in complex networks.
    Ercsey-Ravasz M; Lichtenwalter RN; Chawla NV; Toroczkai Z
    Phys Rev E Stat Nonlin Soft Matter Phys; 2012 Jun; 85(6 Pt 2):066103. PubMed ID: 23005158
    [TBL] [Abstract][Full Text] [Related]  

  • 12. parmigene--a parallel R package for mutual information estimation and gene network reconstruction.
    Sales G; Romualdi C
    Bioinformatics; 2011 Jul; 27(13):1876-7. PubMed ID: 21531770
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SeqFeatR for the Discovery of Feature-Sequence Associations.
    Budeus B; Timm J; Hoffmann D
    PLoS One; 2016; 11(1):e0146409. PubMed ID: 26731669
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Whole transcriptomic network analysis using Co-expression Differential Network Analysis (CoDiNA).
    Morselli Gysi D; de Miranda Fragoso T; Zebardast F; Bertoli W; Busskamp V; Almaas E; Nowick K
    PLoS One; 2020; 15(10):e0240523. PubMed ID: 33057419
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Rediscover: an R package to identify mutually exclusive mutations.
    Ferrer-Bonsoms JA; Jareno L; Rubio A
    Bioinformatics; 2022 Jan; 38(3):844-845. PubMed ID: 34664620
    [TBL] [Abstract][Full Text] [Related]  

  • 16. optCluster: An R Package for Determining the Optimal Clustering Algorithm.
    Sekula M; Datta S; Datta S
    Bioinformation; 2017; 13(3):101-103. PubMed ID: 28584451
    [TBL] [Abstract][Full Text] [Related]  

  • 17. QuACN: an R package for analyzing complex biological networks quantitatively.
    Mueller LA; Kugler KG; Dander A; Graber A; Dehmer M
    Bioinformatics; 2011 Jan; 27(1):140-1. PubMed ID: 21075747
    [TBL] [Abstract][Full Text] [Related]  

  • 18. pegas: an R package for population genetics with an integrated-modular approach.
    Paradis E
    Bioinformatics; 2010 Feb; 26(3):419-20. PubMed ID: 20080509
    [TBL] [Abstract][Full Text] [Related]  

  • 19. APCluster: an R package for affinity propagation clustering.
    Bodenhofer U; Kothmeier A; Hochreiter S
    Bioinformatics; 2011 Sep; 27(17):2463-4. PubMed ID: 21737437
    [TBL] [Abstract][Full Text] [Related]  

  • 20. DCGL v2.0: an R package for unveiling differential regulation from differential co-expression.
    Yang J; Yu H; Liu BH; Zhao Z; Liu L; Ma LX; Li YX; Li YY
    PLoS One; 2013; 8(11):e79729. PubMed ID: 24278165
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.