156 related articles for article (PubMed ID: 30239704)
1. Extensive evaluation of the generalized relevance network approach to inferring gene regulatory networks.
Kuzmanovski V; Todorovski L; Džeroski S
Gigascience; 2018 Nov; 7(11):. PubMed ID: 30239704
[TBL] [Abstract][Full Text] [Related]
2. MICRAT: a novel algorithm for inferring gene regulatory networks using time series gene expression data.
Yang B; Xu Y; Maxwell A; Koh W; Gong P; Zhang C
BMC Syst Biol; 2018 Dec; 12(Suppl 7):115. PubMed ID: 30547796
[TBL] [Abstract][Full Text] [Related]
3. Unraveling gene regulatory networks from time-resolved gene expression data - a measures comparison study.
Hempel S; Koseska A; Nikoloski Z; Kurths J
BMC Bioinformatics; 2011 Jul; 12():292. PubMed ID: 21771321
[TBL] [Abstract][Full Text] [Related]
4. Netter: re-ranking gene network inference predictions using structural network properties.
Ruyssinck J; Demeester P; Dhaene T; Saeys Y
BMC Bioinformatics; 2016 Feb; 17():76. PubMed ID: 26862054
[TBL] [Abstract][Full Text] [Related]
5. Inferring large-scale gene regulatory networks using a low-order constraint-based algorithm.
Wang M; Augusto Benedito V; Xuechun Zhao P; Udvardi M
Mol Biosyst; 2010 Jun; 6(6):988-98. PubMed ID: 20485743
[TBL] [Abstract][Full Text] [Related]
6. BRANE Cut: biologically-related a priori network enhancement with graph cuts for gene regulatory network inference.
Pirayre A; Couprie C; Bidard F; Duval L; Pesquet JC
BMC Bioinformatics; 2015 Nov; 16():368. PubMed ID: 26537179
[TBL] [Abstract][Full Text] [Related]
7. Assessing the Effectiveness of Causality Inference Methods for Gene Regulatory Networks.
Ahmed SS; Roy S; Kalita J
IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(1):56-70. PubMed ID: 29994618
[TBL] [Abstract][Full Text] [Related]
8. Reverse engineering gene regulatory networks: coupling an optimization algorithm with a parameter identification technique.
Hsiao YT; Lee WP
BMC Bioinformatics; 2014; 15 Suppl 15(Suppl 15):S8. PubMed ID: 25474560
[TBL] [Abstract][Full Text] [Related]
9. Hub-centered gene network reconstruction using automatic relevance determination.
Böck M; Ogishima S; Tanaka H; Kramer S; Kaderali L
PLoS One; 2012; 7(5):e35077. PubMed ID: 22570688
[TBL] [Abstract][Full Text] [Related]
10. A Novel Model Integration Network Inference Algorithm with Clustering and Hub Genes Finding.
Li W; Zhang W; Zhang J
Mol Inform; 2020 May; 39(5):e1900075. PubMed ID: 31990443
[TBL] [Abstract][Full Text] [Related]
11. SIN-KNO: A method of gene regulatory network inference using single-cell transcription and gene knockout data.
Wang H; Lian Y; Li C; Ma Y; Yan Z; Dong C
J Bioinform Comput Biol; 2019 Dec; 17(6):1950035. PubMed ID: 32019417
[TBL] [Abstract][Full Text] [Related]
12. Learning a Markov Logic network for supervised gene regulatory network inference.
Brouard C; Vrain C; Dubois J; Castel D; Debily MA; d'Alché-Buc F
BMC Bioinformatics; 2013 Sep; 14():273. PubMed ID: 24028533
[TBL] [Abstract][Full Text] [Related]
13. TIGRNCRN: Trustful inference of gene regulatory network using clustering and refining the network.
Pirgazi J; Khanteymoori AR; Jalilkhani M
J Bioinform Comput Biol; 2019 Jun; 17(3):1950018. PubMed ID: 31288638
[TBL] [Abstract][Full Text] [Related]
14. CN: a consensus algorithm for inferring gene regulatory networks using the SORDER algorithm and conditional mutual information test.
Aghdam R; Ganjali M; Zhang X; Eslahchi C
Mol Biosyst; 2015 Mar; 11(3):942-9. PubMed ID: 25607659
[TBL] [Abstract][Full Text] [Related]
15. Disease gene prioritization by integrating tissue-specific molecular networks using a robust multi-network model.
Ni J; Koyuturk M; Tong H; Haines J; Xu R; Zhang X
BMC Bioinformatics; 2016 Nov; 17(1):453. PubMed ID: 27829360
[TBL] [Abstract][Full Text] [Related]
16. Evaluating methods of inferring gene regulatory networks highlights their lack of performance for single cell gene expression data.
Chen S; Mar JC
BMC Bioinformatics; 2018 Jun; 19(1):232. PubMed ID: 29914350
[TBL] [Abstract][Full Text] [Related]
17. PFBNet: a priori-fused boosting method for gene regulatory network inference.
Che D; Guo S; Jiang Q; Chen L
BMC Bioinformatics; 2020 Jul; 21(1):308. PubMed ID: 32664870
[TBL] [Abstract][Full Text] [Related]
18. Refining regulatory networks through phylogenetic transfer of information.
Zhang X; Moret BM
IEEE/ACM Trans Comput Biol Bioinform; 2012; 9(4):1032-45. PubMed ID: 22547434
[TBL] [Abstract][Full Text] [Related]
19. Inference of gene regulatory networks with multi-objective cellular genetic algorithm.
García-Nieto J; Nebro AJ; Aldana-Montes JF
Comput Biol Chem; 2019 Jun; 80():409-418. PubMed ID: 31128452
[TBL] [Abstract][Full Text] [Related]
20. A novel mutual information-based Boolean network inference method from time-series gene expression data.
Barman S; Kwon YK
PLoS One; 2017; 12(2):e0171097. PubMed ID: 28178334
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
