These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

207 related articles for article (PubMed ID: 30241466)

  • 21. E-zyme: predicting potential EC numbers from the chemical transformation pattern of substrate-product pairs.
    Yamanishi Y; Hattori M; Kotera M; Goto S; Kanehisa M
    Bioinformatics; 2009 Jun; 25(12):i179-86. PubMed ID: 19477985
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Alignment-Free Method to Predict Enzyme Classes and Subclasses.
    Concu R; Cordeiro MNDS
    Int J Mol Sci; 2019 Oct; 20(21):. PubMed ID: 31671806
    [TBL] [Abstract][Full Text] [Related]  

  • 23. BioSeq-Analysis: a platform for DNA, RNA and protein sequence analysis based on machine learning approaches.
    Liu B
    Brief Bioinform; 2019 Jul; 20(4):1280-1294. PubMed ID: 29272359
    [TBL] [Abstract][Full Text] [Related]  

  • 24. deepNEC: a novel alignment-free tool for the identification and classification of nitrogen biochemical network-related enzymes using deep learning.
    Duhan N; Norton JM; Kaundal R
    Brief Bioinform; 2022 May; 23(3):. PubMed ID: 35325031
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Modular prediction of protein structural classes from sequences of twilight-zone identity with predicting sequences.
    Mizianty MJ; Kurgan L
    BMC Bioinformatics; 2009 Dec; 10():414. PubMed ID: 20003388
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Genome-scale classification of metabolic reactions and assignment of EC numbers with self-organizing maps.
    Latino DA; Zhang QY; Aires-de-Sousa J
    Bioinformatics; 2008 Oct; 24(19):2236-44. PubMed ID: 18676416
    [TBL] [Abstract][Full Text] [Related]  

  • 27. EnzML: multi-label prediction of enzyme classes using InterPro signatures.
    De Ferrari L; Aitken S; van Hemert J; Goryanin I
    BMC Bioinformatics; 2012 Apr; 13():61. PubMed ID: 22533924
    [TBL] [Abstract][Full Text] [Related]  

  • 28. DeEPn: a deep neural network based tool for enzyme functional annotation.
    Semwal R; Aier I; Tyagi P; Varadwaj PK
    J Biomol Struct Dyn; 2021 May; 39(8):2733-2743. PubMed ID: 32274968
    [TBL] [Abstract][Full Text] [Related]  

  • 29. SCPRED: accurate prediction of protein structural class for sequences of twilight-zone similarity with predicting sequences.
    Kurgan L; Cios K; Chen K
    BMC Bioinformatics; 2008 May; 9():226. PubMed ID: 18452616
    [TBL] [Abstract][Full Text] [Related]  

  • 30. GOLabeler: improving sequence-based large-scale protein function prediction by learning to rank.
    You R; Zhang Z; Xiong Y; Sun F; Mamitsuka H; Zhu S
    Bioinformatics; 2018 Jul; 34(14):2465-2473. PubMed ID: 29522145
    [TBL] [Abstract][Full Text] [Related]  

  • 31. ProFET: Feature engineering captures high-level protein functions.
    Ofer D; Linial M
    Bioinformatics; 2015 Nov; 31(21):3429-36. PubMed ID: 26130574
    [TBL] [Abstract][Full Text] [Related]  

  • 32. ifDEEPre: large protein language-based deep learning enables interpretable and fast predictions of enzyme commission numbers.
    Tan Q; Xiao J; Chen J; Wang Y; Zhang Z; Zhao T; Li Y
    Brief Bioinform; 2024 May; 25(4):. PubMed ID: 38942594
    [TBL] [Abstract][Full Text] [Related]  

  • 33. iLearnPlus: a comprehensive and automated machine-learning platform for nucleic acid and protein sequence analysis, prediction and visualization.
    Chen Z; Zhao P; Li C; Li F; Xiang D; Chen YZ; Akutsu T; Daly RJ; Webb GI; Zhao Q; Kurgan L; Song J
    Nucleic Acids Res; 2021 Jun; 49(10):e60. PubMed ID: 33660783
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Relationship between global structural parameters and Enzyme Commission hierarchy: implications for function prediction.
    Boareto M; Yamagishi ME; Caticha N; Leite VB
    Comput Biol Chem; 2012 Oct; 40():15-9. PubMed ID: 22926016
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Protein multiple sequence alignment benchmarking through secondary structure prediction.
    Le Q; Sievers F; Higgins DG
    Bioinformatics; 2017 May; 33(9):1331-1337. PubMed ID: 28093407
    [TBL] [Abstract][Full Text] [Related]  

  • 36. DomSign: a top-down annotation pipeline to enlarge enzyme space in the protein universe.
    Wang T; Mori H; Zhang C; Kurokawa K; Xing XH; Yamada T
    BMC Bioinformatics; 2015 Mar; 16():96. PubMed ID: 25888481
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Using Chou's amphiphilic pseudo-amino acid composition and support vector machine for prediction of enzyme subfamily classes.
    Zhou XB; Chen C; Li ZC; Zou XY
    J Theor Biol; 2007 Oct; 248(3):546-51. PubMed ID: 17628605
    [TBL] [Abstract][Full Text] [Related]  

  • 38. SECLAF: a webserver and deep neural network design tool for hierarchical biological sequence classification.
    Szalkai B; Grolmusz V
    Bioinformatics; 2018 Jul; 34(14):2487-2489. PubMed ID: 29490010
    [TBL] [Abstract][Full Text] [Related]  

  • 39. BrEPS 2.0: Optimization of sequence pattern prediction for enzyme annotation.
    Dudek CA; Dannheim H; Schomburg D
    PLoS One; 2017; 12(7):e0182216. PubMed ID: 28750104
    [TBL] [Abstract][Full Text] [Related]  

  • 40. SLPred: a multi-view subcellular localization prediction tool for multi-location human proteins.
    Özsarı G; Rifaioglu AS; Atakan A; Doğan T; Martin MJ; Çetin Atalay R; Atalay V
    Bioinformatics; 2022 Sep; 38(17):4226-4229. PubMed ID: 35801913
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 11.