BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

215 related articles for article (PubMed ID: 30277394)

  • 1. DNA Solvation Dynamics.
    Mukherjee S; Mondal S; Acharya S; Bagchi B
    J Phys Chem B; 2018 Dec; 122(49):11743-11761. PubMed ID: 30277394
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Multiple time scales in solvation dynamics of DNA in aqueous solution: the role of water, counterions, and cross-correlations.
    Pal S; Maiti PK; Bagchi B; Hynes JT
    J Phys Chem B; 2006 Dec; 110(51):26396-402. PubMed ID: 17181299
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Origin of Slow Solvation Dynamics in DNA: DAPI in Minor Groove of Dickerson-Drew DNA.
    Sardana D; Yadav K; Shweta H; Clovis NS; Alam P; Sen S
    J Phys Chem B; 2019 Dec; 123(48):10202-10216. PubMed ID: 31589442
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Mode coupling theory analysis of electrolyte solutions: Time dependent diffusion, intermediate scattering function, and ion solvation dynamics.
    Roy S; Yashonath S; Bagchi B
    J Chem Phys; 2015 Mar; 142(12):124502. PubMed ID: 25833591
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Power-Law Solvation Dynamics in G-Quadruplex DNA: Role of Hydration Dynamics on Ligand Solvation inside DNA.
    Pal N; Shweta H; Singh MK; Verma SD; Sen S
    J Phys Chem Lett; 2015 May; 6(9):1754-60. PubMed ID: 26263345
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Origin of diverse time scales in the protein hydration layer solvation dynamics: A simulation study.
    Mondal S; Mukherjee S; Bagchi B
    J Chem Phys; 2017 Oct; 147(15):154901. PubMed ID: 29055291
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Explicit ions/implicit water generalized Born model for nucleic acids.
    Tolokh IS; Thomas DG; Onufriev AV
    J Chem Phys; 2018 May; 148(19):195101. PubMed ID: 30307229
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A 5-nanosecond molecular dynamics trajectory for B-DNA: analysis of structure, motions, and solvation.
    Young MA; Ravishanker G; Beveridge DL
    Biophys J; 1997 Nov; 73(5):2313-36. PubMed ID: 9370428
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Studies of base pair sequence effects on DNA solvation based on all-atom molecular dynamics simulations.
    Dixit SB; Mezei M; Beveridge DL
    J Biosci; 2012 Jul; 37(3):399-421. PubMed ID: 22750979
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Solvation dynamics of Hoechst 33258 in water: an equilibrium and nonequilibrium molecular dynamics study.
    Furse KE; Lindquist BA; Corcelli SA
    J Phys Chem B; 2008 Mar; 112(10):3231-9. PubMed ID: 18271577
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Ion-specific solvation water dynamics: single water versus collective water effects.
    Rinne KF; Gekle S; Netz RR
    J Phys Chem A; 2014 Dec; 118(50):11667-77. PubMed ID: 25474321
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Vibration Spectral Dynamics of Weakly Coordinating Water Molecules near an Anion: FPMD Simulations of an Aqueous Solution of Tetrafluoroborate.
    Biswas S; Mallik BS
    J Phys Chem B; 2019 Mar; 123(9):2135-2146. PubMed ID: 30759344
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Influence of Divalent Counterions on the Dynamics in DNA as Probed by Using a Minor-Groove Binder.
    Paul S; Ahmed T; Samanta A
    Chemphyschem; 2017 Aug; 18(15):2058-2064. PubMed ID: 28418099
    [TBL] [Abstract][Full Text] [Related]  

  • 14. In search of temporal power laws in the orientational relaxation near isotropic-nematic phase transition in model nematogens.
    Jose PP; Bagchi B
    J Chem Phys; 2004 Jun; 120(23):11256-66. PubMed ID: 15268154
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Exploring DNA groove water dynamics through hydrogen bond lifetime and orientational relaxation.
    Pal S; Maiti PK; Bagchi B
    J Chem Phys; 2006 Dec; 125(23):234903. PubMed ID: 17190573
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Probe Position-Dependent Counterion Dynamics in DNA: Comparison of Time-Resolved Stokes Shift of Groove-Bound to Base-Stacked Probes in the Presence of Different Monovalent Counterions.
    Verma SD; Pal N; Singh MK; Sen S
    J Phys Chem Lett; 2012 Sep; 3(18):2621-6. PubMed ID: 26295881
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Bimodal 1/
    Mukherjee S; Mondal S; Bagchi B
    J Phys Chem B; 2023 Mar; 127(9):1965-1975. PubMed ID: 36853997
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Molecular dynamics simulations of alkaline earth metal ions binding to DNA reveal ion size and hydration effects.
    Long MP; Alland S; Martin ME; Isborn CM
    Phys Chem Chem Phys; 2020 Mar; 22(10):5584-5596. PubMed ID: 32107511
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Sequence-Dependent Solvation Dynamics of Minor-Groove Bound Ligand Inside Duplex-DNA.
    Verma SD; Pal N; Singh MK; Sen S
    J Phys Chem B; 2015 Aug; 119(34):11019-29. PubMed ID: 25965992
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Multiple time step molecular dynamics in the optimized isokinetic ensemble steered with the molecular theory of solvation: accelerating with advanced extrapolation of effective solvation forces.
    Omelyan I; Kovalenko A
    J Chem Phys; 2013 Dec; 139(24):244106. PubMed ID: 24387356
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.