1594 related articles for article (PubMed ID: 30287354)
1. Practical considerations for sampling and data analysis in contemporary metagenomics-based environmental studies.
Staley C; Sadowsky MJ
J Microbiol Methods; 2018 Nov; 154():14-18. PubMed ID: 30287354
[TBL] [Abstract][Full Text] [Related]
2. From bacterial to microbial ecosystems (metagenomics).
Williamson SJ; Yooseph S
Methods Mol Biol; 2012; 804():35-55. PubMed ID: 22144147
[TBL] [Abstract][Full Text] [Related]
3. Microbial community analysis using high-throughput sequencing technology: a beginner's guide for microbiologists.
Jo J; Oh J; Park C
J Microbiol; 2020 Mar; 58(3):176-192. PubMed ID: 32108314
[TBL] [Abstract][Full Text] [Related]
4. Bioinformatics for NGS-based metagenomics and the application to biogas research.
Jünemann S; Kleinbölting N; Jaenicke S; Henke C; Hassa J; Nelkner J; Stolze Y; Albaum SP; Schlüter A; Goesmann A; Sczyrba A; Stoye J
J Biotechnol; 2017 Nov; 261():10-23. PubMed ID: 28823476
[TBL] [Abstract][Full Text] [Related]
5. Metagenomics using next-generation sequencing.
Bragg L; Tyson GW
Methods Mol Biol; 2014; 1096():183-201. PubMed ID: 24515370
[TBL] [Abstract][Full Text] [Related]
6. MetCap: a bioinformatics probe design pipeline for large-scale targeted metagenomics.
Kushwaha SK; Manoharan L; Meerupati T; Hedlund K; Ahrén D
BMC Bioinformatics; 2015 Feb; 16(1):65. PubMed ID: 25880302
[TBL] [Abstract][Full Text] [Related]
7. Targeted metagenomics: a high-resolution metagenomics approach for specific gene clusters in complex microbial communities.
Suenaga H
Environ Microbiol; 2012 Jan; 14(1):13-22. PubMed ID: 21366818
[TBL] [Abstract][Full Text] [Related]
8. Metagenomic approaches in microbial ecology: an update on whole-genome and marker gene sequencing analyses.
Pérez-Cobas AE; Gomez-Valero L; Buchrieser C
Microb Genom; 2020 Aug; 6(8):. PubMed ID: 32706331
[TBL] [Abstract][Full Text] [Related]
9. metaBIT, an integrative and automated metagenomic pipeline for analysing microbial profiles from high-throughput sequencing shotgun data.
Louvel G; Der Sarkissian C; Hanghøj K; Orlando L
Mol Ecol Resour; 2016 Nov; 16(6):1415-1427. PubMed ID: 27238636
[TBL] [Abstract][Full Text] [Related]
10. Large-scale differences in microbial biodiversity discovery between 16S amplicon and shotgun sequencing.
Tessler M; Neumann JS; Afshinnekoo E; Pineda M; Hersch R; Velho LFM; Segovia BT; Lansac-Toha FA; Lemke M; DeSalle R; Mason CE; Brugler MR
Sci Rep; 2017 Jul; 7(1):6589. PubMed ID: 28761145
[TBL] [Abstract][Full Text] [Related]
11. Metagenomics methods for the study of plant-associated microbial communities: A review.
Fadiji AE; Babalola OO
J Microbiol Methods; 2020 Mar; 170():105860. PubMed ID: 32027927
[TBL] [Abstract][Full Text] [Related]
12. Mastering methodological pitfalls for surviving the metagenomic jungle.
Delmont TO; Simonet P; Vogel TM
Bioessays; 2013 Aug; 35(8):744-54. PubMed ID: 23757040
[TBL] [Abstract][Full Text] [Related]
13. Bioinformatics tools to assess metagenomic data for applied microbiology.
Almeida OGG; De Martinis ECP
Appl Microbiol Biotechnol; 2019 Jan; 103(1):69-82. PubMed ID: 30362076
[TBL] [Abstract][Full Text] [Related]
14. A bioinformatics pipeline integrating predictive metagenomics profiling for the analysis of 16S rDNA/rRNA sequencing data originated from foods.
Mataragas M; Alessandria V; Ferrocino I; Rantsiou K; Cocolin L
Food Microbiol; 2018 Dec; 76():279-286. PubMed ID: 30166151
[TBL] [Abstract][Full Text] [Related]
15. Metagenomic tools in microbial ecology research.
Taş N; de Jong AE; Li Y; Trubl G; Xue Y; Dove NC
Curr Opin Biotechnol; 2021 Feb; 67():184-191. PubMed ID: 33592536
[TBL] [Abstract][Full Text] [Related]
16. Metagenomic assembly through the lens of validation: recent advances in assessing and improving the quality of genomes assembled from metagenomes.
Olson ND; Treangen TJ; Hill CM; Cepeda-Espinoza V; Ghurye J; Koren S; Pop M
Brief Bioinform; 2019 Jul; 20(4):1140-1150. PubMed ID: 28968737
[TBL] [Abstract][Full Text] [Related]
17. PanFP: pangenome-based functional profiles for microbial communities.
Jun SR; Robeson MS; Hauser LJ; Schadt CW; Gorin AA
BMC Res Notes; 2015 Sep; 8():479. PubMed ID: 26409790
[TBL] [Abstract][Full Text] [Related]
18. Species classifier choice is a key consideration when analysing low-complexity food microbiome data.
Walsh AM; Crispie F; O'Sullivan O; Finnegan L; Claesson MJ; Cotter PD
Microbiome; 2018 Mar; 6(1):50. PubMed ID: 29554948
[TBL] [Abstract][Full Text] [Related]
19. High throughput sequencing methods and analysis for microbiome research.
Di Bella JM; Bao Y; Gloor GB; Burton JP; Reid G
J Microbiol Methods; 2013 Dec; 95(3):401-14. PubMed ID: 24029734
[TBL] [Abstract][Full Text] [Related]
20. Interactive Web-Based Services for Metagenomic Data Analysis and Comparisons.
Abdelsalam NA; Elshora H; El-Hadidi M
Methods Mol Biol; 2023; 2649():133-174. PubMed ID: 37258861
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
