These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

149 related articles for article (PubMed ID: 30295745)

  • 1. cath-resolve-hits: a new tool that resolves domain matches suspiciously quickly.
    Lewis TE; Sillitoe I; Lees JG
    Bioinformatics; 2019 May; 35(10):1766-1767. PubMed ID: 30295745
    [TBL] [Abstract][Full Text] [Related]  

  • 2. ODGI: understanding pangenome graphs.
    Guarracino A; Heumos S; Nahnsen S; Prins P; Garrison E
    Bioinformatics; 2022 Jun; 38(13):3319-3326. PubMed ID: 35552372
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A multi-objective optimization approach accurately resolves protein domain architectures.
    Bernardes JS; Vieira FR; Zaverucha G; Carbone A
    Bioinformatics; 2016 Feb; 32(3):345-53. PubMed ID: 26458889
    [TBL] [Abstract][Full Text] [Related]  

  • 4. GSEApy: a comprehensive package for performing gene set enrichment analysis in Python.
    Fang Z; Liu X; Peltz G
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36426870
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SPECTRE: a suite of phylogenetic tools for reticulate evolution.
    Bastkowski S; Mapleson D; Spillner A; Wu T; Balvociute M; Moulton V
    Bioinformatics; 2018 Mar; 34(6):1056-1057. PubMed ID: 29186450
    [TBL] [Abstract][Full Text] [Related]  

  • 6. BioQueue: a novel pipeline framework to accelerate bioinformatics analysis.
    Yao L; Wang H; Song Y; Sui G
    Bioinformatics; 2017 Oct; 33(20):3286-3288. PubMed ID: 28633441
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Simulating Illumina metagenomic data with InSilicoSeq.
    Gourlé H; Karlsson-Lindsjö O; Hayer J; Bongcam-Rudloff E
    Bioinformatics; 2019 Feb; 35(3):521-522. PubMed ID: 30016412
    [TBL] [Abstract][Full Text] [Related]  

  • 8. copMEM: finding maximal exact matches via sampling both genomes.
    Grabowski S; Bieniecki W
    Bioinformatics; 2019 Feb; 35(4):677-678. PubMed ID: 30060142
    [TBL] [Abstract][Full Text] [Related]  

  • 9. nVenn: generalized, quasi-proportional Venn and Euler diagrams.
    Pérez-Silva JG; Araujo-Voces M; Quesada V
    Bioinformatics; 2018 Jul; 34(13):2322-2324. PubMed ID: 29949954
    [TBL] [Abstract][Full Text] [Related]  

  • 10. PERF: an exhaustive algorithm for ultra-fast and efficient identification of microsatellites from large DNA sequences.
    Avvaru AK; Sowpati DT; Mishra RK
    Bioinformatics; 2018 Mar; 34(6):943-948. PubMed ID: 29121165
    [TBL] [Abstract][Full Text] [Related]  

  • 11. ASTRAL-MP: scaling ASTRAL to very large datasets using randomization and parallelization.
    Yin J; Zhang C; Mirarab S
    Bioinformatics; 2019 Oct; 35(20):3961-3969. PubMed ID: 30903685
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ganon: precise metagenomics classification against large and up-to-date sets of reference sequences.
    Piro VC; Dadi TH; Seiler E; Reinert K; Renard BY
    Bioinformatics; 2020 Jul; 36(Suppl_1):i12-i20. PubMed ID: 32657362
    [TBL] [Abstract][Full Text] [Related]  

  • 13. TDAview: an online visualization tool for topological data analysis.
    Walsh K; Voineagu MA; Vafaee F; Voineagu I
    Bioinformatics; 2020 Sep; 36(18):4805-4809. PubMed ID: 32614445
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ipyrad: Interactive assembly and analysis of RADseq datasets.
    Eaton DAR; Overcast I
    Bioinformatics; 2020 Apr; 36(8):2592-2594. PubMed ID: 31904816
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The CroCo cross-link converter: a user-centred tool to convert results from cross-linking mass spectrometry experiments.
    Bender J; Schmidt C
    Bioinformatics; 2020 Feb; 36(4):1296-1297. PubMed ID: 31562766
    [TBL] [Abstract][Full Text] [Related]  

  • 16. CATHe: detection of remote homologues for CATH superfamilies using embeddings from protein language models.
    Nallapareddy V; Bordin N; Sillitoe I; Heinzinger M; Littmann M; Waman VP; Sen N; Rost B; Orengo C
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36648327
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A fast and automated solution for accurately resolving protein domain architectures.
    Yeats C; Redfern OC; Orengo C
    Bioinformatics; 2010 Mar; 26(6):745-51. PubMed ID: 20118117
    [TBL] [Abstract][Full Text] [Related]  

  • 18. FuMa: reporting overlap in RNA-seq detected fusion genes.
    Hoogstrate Y; Böttcher R; Hiltemann S; van der Spek PJ; Jenster G; Stubbs AP
    Bioinformatics; 2016 Apr; 32(8):1226-8. PubMed ID: 26656567
    [TBL] [Abstract][Full Text] [Related]  

  • 19. CONSTAX2: improved taxonomic classification of environmental DNA markers.
    Liber JA; Bonito G; Benucci GMN
    Bioinformatics; 2021 Nov; 37(21):3941-3943. PubMed ID: 33961008
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Fast detection of maximal exact matches via fixed sampling of query K-mers and Bloom filtering of index K-mers.
    Liu Y; Zhang LY; Li J
    Bioinformatics; 2019 Nov; 35(22):4560-4567. PubMed ID: 30994891
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.