These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
4. Discovery and Evaluation of Biosynthetic Pathways for the Production of Five Methyl Ethyl Ketone Precursors. Tokic M; Hadadi N; Ataman M; Neves D; Ebert BE; Blank LM; Miskovic L; Hatzimanikatis V ACS Synth Biol; 2018 Aug; 7(8):1858-1873. PubMed ID: 30021444 [TBL] [Abstract][Full Text] [Related]
6. Molecular tools for chemical biotechnology. Galanie S; Siddiqui MS; Smolke CD Curr Opin Biotechnol; 2013 Dec; 24(6):1000-9. PubMed ID: 23528237 [TBL] [Abstract][Full Text] [Related]
7. Computationally Prospecting Potential Pathways from Lignin Monomers and Dimers toward Aromatic Compounds. Wang L; Maranas CD ACS Synth Biol; 2021 May; 10(5):1064-1076. PubMed ID: 33877818 [TBL] [Abstract][Full Text] [Related]
8. De novo design of biosynthetic pathways for bacterial production of bulk chemicals and biofuels. Okano K; Honda K; Taniguchi H; Kondo A FEMS Microbiol Lett; 2018 Oct; 365(20):. PubMed ID: 30169822 [TBL] [Abstract][Full Text] [Related]
9. Production of bulk chemicals via novel metabolic pathways in microorganisms. Shin JH; Kim HU; Kim DI; Lee SY Biotechnol Adv; 2013 Nov; 31(6):925-35. PubMed ID: 23280013 [TBL] [Abstract][Full Text] [Related]
10. Cutting-edge plant natural product pathway elucidation. Han J; Miller EP; Li S Curr Opin Biotechnol; 2024 Jun; 87():103137. PubMed ID: 38677219 [TBL] [Abstract][Full Text] [Related]
11. Integrating computational methods to retrofit enzymes to synthetic pathways. Brunk E; Neri M; Tavernelli I; Hatzimanikatis V; Rothlisberger U Biotechnol Bioeng; 2012 Feb; 109(2):572-82. PubMed ID: 21928337 [TBL] [Abstract][Full Text] [Related]
12. ARBRE: Computational resource to predict pathways towards industrially important aromatic compounds. Sveshnikova A; MohammadiPeyhani H; Hatzimanikatis V Metab Eng; 2022 Jul; 72():259-274. PubMed ID: 35381376 [TBL] [Abstract][Full Text] [Related]
13. Chemical-damage MINE: A database of curated and predicted spontaneous metabolic reactions. Jeffryes JG; Lerma-Ortiz C; Liu F; Golubev A; Niehaus TD; Elbadawi-Sidhu M; Fiehn O; Hanson AD; Tyo KE; Henry CS Metab Eng; 2022 Jan; 69():302-312. PubMed ID: 34958914 [TBL] [Abstract][Full Text] [Related]
15. ATLAS of Biochemistry: A Repository of All Possible Biochemical Reactions for Synthetic Biology and Metabolic Engineering Studies. Hadadi N; Hafner J; Shajkofci A; Zisaki A; Hatzimanikatis V ACS Synth Biol; 2016 Oct; 5(10):1155-1166. PubMed ID: 27404214 [TBL] [Abstract][Full Text] [Related]
16. Prediction of metabolic reactions based on atomic and molecular properties of small-molecule compounds. Mu F; Unkefer CJ; Unkefer PJ; Hlavacek WS Bioinformatics; 2011 Jun; 27(11):1537-45. PubMed ID: 21478194 [TBL] [Abstract][Full Text] [Related]
17. Pathway design using de novo steps through uncharted biochemical spaces. Kumar A; Wang L; Ng CY; Maranas CD Nat Commun; 2018 Jan; 9(1):184. PubMed ID: 29330441 [TBL] [Abstract][Full Text] [Related]
18. Mining electronic laboratory notebooks: analysis, retrosynthesis, and reaction based enumeration. Christ CD; Zentgraf M; Kriegl JM J Chem Inf Model; 2012 Jul; 52(7):1745-56. PubMed ID: 22657734 [TBL] [Abstract][Full Text] [Related]
19. Molecular structures enumeration and virtual screening in the chemical space with RetroPath2.0. Koch M; Duigou T; Carbonell P; Faulon JL J Cheminform; 2017 Dec; 9(1):64. PubMed ID: 29260340 [TBL] [Abstract][Full Text] [Related]
20. Functional group and substructure searching as a tool in metabolomics. Kotera M; McDonald AG; Boyce S; Tipton KF PLoS One; 2008 Feb; 3(2):e1537. PubMed ID: 18253485 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]