These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

103 related articles for article (PubMed ID: 30332415)

  • 41. PloGO: plotting gene ontology annotation and abundance in multi-condition proteomics experiments.
    Pascovici D; Keighley T; Mirzaei M; Haynes PA; Cooke B
    Proteomics; 2012 Feb; 12(3):406-10. PubMed ID: 22213732
    [TBL] [Abstract][Full Text] [Related]  

  • 42. Statistical geometry based prediction of nonsynonymous SNP functional effects using random forest and neuro-fuzzy classifiers.
    Barenboim M; Masso M; Vaisman II; Jamison DC
    Proteins; 2008 Jun; 71(4):1930-9. PubMed ID: 18186470
    [TBL] [Abstract][Full Text] [Related]  

  • 43. The ConSurf-HSSP database: the mapping of evolutionary conservation among homologs onto PDB structures.
    Glaser F; Rosenberg Y; Kessel A; Pupko T; Ben-Tal N
    Proteins; 2005 Feb; 58(3):610-7. PubMed ID: 15614759
    [TBL] [Abstract][Full Text] [Related]  

  • 44. Predicting functional sites with an automated algorithm suitable for heterogeneous datasets.
    La D; Livesay DR
    BMC Bioinformatics; 2005 May; 6():116. PubMed ID: 15890082
    [TBL] [Abstract][Full Text] [Related]  

  • 45. Shedding light on black boxes in protein identification.
    Vaudel M; Venne AS; Berven FS; Zahedi RP; Martens L; Barsnes H
    Proteomics; 2014 May; 14(9):1001-5. PubMed ID: 24678044
    [TBL] [Abstract][Full Text] [Related]  

  • 46. PathRings: a web-based tool for exploration of ortholog and expression data in biological pathways.
    Zhu Y; Sun L; Garbarino A; Schmidt C; Fang J; Chen J
    BMC Bioinformatics; 2015 May; 16(1):165. PubMed ID: 25982732
    [TBL] [Abstract][Full Text] [Related]  

  • 47. Comparison of sequence and structure-based datasets for nonredundant structural data mining.
    Chu CK; Feng LL; Wouters MA
    Proteins; 2005 Sep; 60(4):577-83. PubMed ID: 16001417
    [TBL] [Abstract][Full Text] [Related]  

  • 48. Pinpointing differentially expressed domains in complex protein mixtures with the cloud service of PatternLab for Proteomics.
    Leprevost FV; Lima DB; Crestani J; Perez-Riverol Y; Zanchin N; Barbosa VC; Carvalho PC
    J Proteomics; 2013 Aug; 89():179-82. PubMed ID: 23796493
    [TBL] [Abstract][Full Text] [Related]  

  • 49. Lineage-specific mutational clustering in protein structures predicts evolutionary shifts in function.
    Adams J; Mansfield MJ; Richard DJ; Doxey AC
    Bioinformatics; 2017 May; 33(9):1338-1345. PubMed ID: 28052926
    [TBL] [Abstract][Full Text] [Related]  

  • 50. The proteios software environment: an extensible multiuser platform for management and analysis of proteomics data.
    Häkkinen J; Vincic G; Månsson O; Wårell K; Levander F
    J Proteome Res; 2009 Jun; 8(6):3037-43. PubMed ID: 19354269
    [TBL] [Abstract][Full Text] [Related]  

  • 51. On the quality of tree-based protein classification.
    Lazareva-Ulitsky B; Diemer K; Thomas PD
    Bioinformatics; 2005 May; 21(9):1876-90. PubMed ID: 15647305
    [TBL] [Abstract][Full Text] [Related]  

  • 52. pyOpenMS: a Python-based interface to the OpenMS mass-spectrometry algorithm library.
    Röst HL; Schmitt U; Aebersold R; Malmström L
    Proteomics; 2014 Jan; 14(1):74-7. PubMed ID: 24420968
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Ghost-tree: creating hybrid-gene phylogenetic trees for diversity analyses.
    Fouquier J; Rideout JR; Bolyen E; Chase J; Shiffer A; McDonald D; Knight R; Caporaso JG; Kelley ST
    Microbiome; 2016 Feb; 4():11. PubMed ID: 26905735
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Fast model-based protein homology detection without alignment.
    Hochreiter S; Heusel M; Obermayer K
    Bioinformatics; 2007 Jul; 23(14):1728-36. PubMed ID: 17488755
    [TBL] [Abstract][Full Text] [Related]  

  • 55. TOPPView: an open-source viewer for mass spectrometry data.
    Sturm M; Kohlbacher O
    J Proteome Res; 2009 Jul; 8(7):3760-3. PubMed ID: 19425593
    [TBL] [Abstract][Full Text] [Related]  

  • 56. multiplierz v2.0: A Python-based ecosystem for shared access and analysis of native mass spectrometry data.
    Alexander WM; Ficarro SB; Adelmant G; Marto JA
    Proteomics; 2017 Aug; 17(15-16):. PubMed ID: 28686798
    [TBL] [Abstract][Full Text] [Related]  

  • 57. ezTree: an automated pipeline for identifying phylogenetic marker genes and inferring evolutionary relationships among uncultivated prokaryotic draft genomes.
    Wu YW
    BMC Genomics; 2018 Jan; 19(Suppl 1):921. PubMed ID: 29363425
    [TBL] [Abstract][Full Text] [Related]  

  • 58. MulRF: a software package for phylogenetic analysis using multi-copy gene trees.
    Chaudhary R; Fernández-Baca D; Burleigh JG
    Bioinformatics; 2015 Feb; 31(3):432-3. PubMed ID: 25273112
    [TBL] [Abstract][Full Text] [Related]  

  • 59. Structure_threader: An improved method for automation and parallelization of programs structure, fastStructure and MavericK on multicore CPU systems.
    Pina-Martins F; Silva DN; Fino J; Paulo OS
    Mol Ecol Resour; 2017 Nov; 17(6):e268-e274. PubMed ID: 28776963
    [TBL] [Abstract][Full Text] [Related]  

  • 60. CFVisual: an interactive desktop platform for drawing gene structure and protein architecture.
    Chen H; Song X; Shang Q; Feng S; Ge W
    BMC Bioinformatics; 2022 May; 23(1):178. PubMed ID: 35562653
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 6.