BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

195 related articles for article (PubMed ID: 30370679)

  • 1. Gaining insight into transcriptome-wide RNA population dynamics through the chemistry of 4-thiouridine.
    Duffy EE; Schofield JA; Simon MD
    Wiley Interdiscip Rev RNA; 2019 Jan; 10(1):e1513. PubMed ID: 30370679
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Expanding the Nucleoside Recoding Toolkit: Revealing RNA Population Dynamics with 6-Thioguanosine.
    Kiefer L; Schofield JA; Simon MD
    J Am Chem Soc; 2018 Nov; 140(44):14567-14570. PubMed ID: 30353734
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Enriching s
    Duffy EE; Simon MD
    Curr Protoc Chem Biol; 2016 Dec; 8(4):234-250. PubMed ID: 27925666
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Thiouridine-to-Cytidine Conversion Sequencing (TUC-Seq) to Measure mRNA Transcription and Degradation Rates.
    Lusser A; Gasser C; Trixl L; Piatti P; Delazer I; Rieder D; Bashin J; Riml C; Amort T; Micura R
    Methods Mol Biol; 2020; 2062():191-211. PubMed ID: 31768978
    [TBL] [Abstract][Full Text] [Related]  

  • 5. High-Resolution Gene Expression Profiling of RNA Synthesis, Processing, and Decay by Metabolic Labeling of Newly Transcribed RNA Using 4-Thiouridine.
    Rutkowski AJ; Dölken L
    Methods Mol Biol; 2017; 1507():129-140. PubMed ID: 27832537
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Transcriptome-Wide Profiling of RNA Stability.
    Fasching N; Petržílek J; Popitsch N; Herzog VA; Ameres SL
    Methods Mol Biol; 2022; 2404():311-330. PubMed ID: 34694617
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Determining mRNA Stability by Metabolic RNA Labeling and Chemical Nucleoside Conversion.
    Herzog VA; Fasching N; Ameres SL
    Methods Mol Biol; 2020; 2062():169-189. PubMed ID: 31768977
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Tracking Distinct RNA Populations Using Efficient and Reversible Covalent Chemistry.
    Duffy EE; Rutenberg-Schoenberg M; Stark CD; Kitchen RR; Gerstein MB; Simon MD
    Mol Cell; 2015 Sep; 59(5):858-66. PubMed ID: 26340425
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Isolation of Newly Transcribed RNA Using the Metabolic Label 4-Thiouridine.
    Garibaldi A; Carranza F; Hertel KJ
    Methods Mol Biol; 2017; 1648():169-176. PubMed ID: 28766297
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Genome-wide dynamics of RNA synthesis, processing, and degradation without RNA metabolic labeling.
    Furlan M; Galeota E; Gaudio ND; Dassi E; Caselle M; de Pretis S; Pelizzola M
    Genome Res; 2020 Oct; 30(10):1492-1507. PubMed ID: 32978246
    [TBL] [Abstract][Full Text] [Related]  

  • 11. TimeLapse-seq: adding a temporal dimension to RNA sequencing through nucleoside recoding.
    Schofield JA; Duffy EE; Kiefer L; Sullivan MC; Simon MD
    Nat Methods; 2018 Mar; 15(3):221-225. PubMed ID: 29355846
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Improving the study of RNA dynamics through advances in RNA-seq with metabolic labeling and nucleotide-recoding chemistry.
    Zimmer JT; Vock IW; Schofield JA; Kiefer L; Moon MH; Simon MD
    bioRxiv; 2023 May; ():. PubMed ID: 37292657
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Internally controlled RNA sequencing comparisons using nucleoside recoding chemistry.
    Courvan MCS; Niederer RO; Vock IW; Kiefer L; Gilbert WV; Simon MD
    Nucleic Acids Res; 2022 Oct; 50(19):e110. PubMed ID: 36018791
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Metabolic Labeling of Newly Synthesized RNA with 4sU to in Parallel Assess RNA Transcription and Decay.
    Sun W; Chen W
    Methods Mol Biol; 2018; 1720():25-34. PubMed ID: 29236249
    [TBL] [Abstract][Full Text] [Related]  

  • 15. 4-Thiouridine-Enhanced Peroxidase-Generated Biotinylation of RNA.
    Huang J; Zhao R; Qin S; Yang S; Li W; Mo J; Wang F; Du Y; Weng X; Zhou X
    Chembiochem; 2021 Jan; 22(1):212-216. PubMed ID: 32864814
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Metabolic labeling of newly transcribed RNA for high resolution gene expression profiling of RNA synthesis, processing and decay in cell culture.
    Rädle B; Rutkowski AJ; Ruzsics Z; Friedel CC; Koszinowski UH; Dölken L
    J Vis Exp; 2013 Aug; (78):. PubMed ID: 23963265
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A Protocol for Transcriptome-Wide Inference of RNA Metabolic Rates in Mouse Embryonic Stem Cells.
    Biasini A; Marques AC
    Front Cell Dev Biol; 2020; 8():97. PubMed ID: 32175319
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Global analysis of RNA metabolism using bio-orthogonal labeling coupled with next-generation RNA sequencing.
    Wolfe MB; Goldstrohm AC; Freddolino PL
    Methods; 2019 Feb; 155():88-103. PubMed ID: 30529548
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Osmium-Mediated Transformation of 4-Thiouridine to Cytidine as Key To Study RNA Dynamics by Sequencing.
    Riml C; Amort T; Rieder D; Gasser C; Lusser A; Micura R
    Angew Chem Int Ed Engl; 2017 Oct; 56(43):13479-13483. PubMed ID: 28817234
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Addition-Elimination Mechanism-Activated Nucleotide Transition Sequencing for RNA Dynamics Profiling.
    Su L; Chen F; Yu H; Yan H; Zhao F; Fan C; Zhao Y
    Anal Chem; 2021 Oct; 93(41):13974-13980. PubMed ID: 34612623
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.