These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

177 related articles for article (PubMed ID: 30414112)

  • 1. The GFF3toolkit: QC and Merge Pipeline for Genome Annotation.
    Chen MM; Lin H; Chiang LM; Childers CP; Poelchau MF
    Methods Mol Biol; 2019; 1858():75-87. PubMed ID: 30414112
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Navigating the i5k Workspace@NAL: A Resource for Arthropod Genomes.
    Poelchau MF; Chen MM; Lin YY; Childers CP
    Methods Mol Biol; 2018; 1757():557-577. PubMed ID: 29761470
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Using BUSCO to Assess Insect Genomic Resources.
    Waterhouse RM; Seppey M; Simão FA; Zdobnov EM
    Methods Mol Biol; 2019; 1858():59-74. PubMed ID: 30414111
    [TBL] [Abstract][Full Text] [Related]  

  • 4. EMBLmyGFF3: a converter facilitating genome annotation submission to European Nucleotide Archive.
    Norling M; Jareborg N; Dainat J
    BMC Res Notes; 2018 Aug; 11(1):584. PubMed ID: 30103816
    [TBL] [Abstract][Full Text] [Related]  

  • 5. GFF3sort: a novel tool to sort GFF3 files for tabix indexing.
    Zhu T; Liang C; Meng Z; Guo S; Zhang R
    BMC Bioinformatics; 2017 Nov; 18(1):482. PubMed ID: 29137598
    [TBL] [Abstract][Full Text] [Related]  

  • 6. GAD: A Python Script for Dividing Genome Annotation Files into Feature-Based Files.
    Yasser N; Karam A
    Interdiscip Sci; 2020 Sep; 12(3):377-381. PubMed ID: 32524530
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Whole-Genome Bisulfite Sequencing for the Methylation Analysis of Insect Genomes.
    Gatzmann F; Lyko F
    Methods Mol Biol; 2019; 1858():141-156. PubMed ID: 30414116
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The i5k Workspace@NAL--enabling genomic data access, visualization and curation of arthropod genomes.
    Poelchau M; Childers C; Moore G; Tsavatapalli V; Evans J; Lee CY; Lin H; Lin JW; Hackett K
    Nucleic Acids Res; 2015 Jan; 43(Database issue):D714-9. PubMed ID: 25332403
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Using RAMPAGE to Identify and Annotate Promoters in Insect Genomes.
    Raborn RT; Brendel VP
    Methods Mol Biol; 2019; 1858():99-116. PubMed ID: 30414114
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Bioinformatic Analysis of Methylation Patterns Using Bisulfite Sequencing Data.
    Asselman J
    Methods Mol Biol; 2019; 1858():157-175. PubMed ID: 30414117
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CRM Discovery Beyond Model Insects.
    Kazemian M; Halfon MS
    Methods Mol Biol; 2019; 1858():117-139. PubMed ID: 30414115
    [TBL] [Abstract][Full Text] [Related]  

  • 12. GFF Utilities: GffRead and GffCompare.
    Pertea G; Pertea M
    F1000Res; 2020; 9():. PubMed ID: 32489650
    [No Abstract]   [Full Text] [Related]  

  • 13. MitoZ: a toolkit for animal mitochondrial genome assembly, annotation and visualization.
    Meng G; Li Y; Yang C; Liu S
    Nucleic Acids Res; 2019 Jun; 47(11):e63. PubMed ID: 30864657
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Long Range Sequencing and Validation of Insect Genome Assemblies.
    Saha S
    Methods Mol Biol; 2019; 1858():33-44. PubMed ID: 30414109
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RGAAT: A Reference-based Genome Assembly and Annotation Tool for New Genomes and Upgrade of Known Genomes.
    Liu W; Wu S; Lin Q; Gao S; Ding F; Zhang X; Aljohi HA; Yu J; Hu S
    Genomics Proteomics Bioinformatics; 2018 Oct; 16(5):373-381. PubMed ID: 30583062
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Using KBase to Assemble and Annotate Prokaryotic Genomes.
    Allen B; Drake M; Harris N; Sullivan T
    Curr Protoc Microbiol; 2017 Aug; 46():1E.13.1-1E.13.18. PubMed ID: 28800158
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Jannovar: a java library for exome annotation.
    Jäger M; Wang K; Bauer S; Smedley D; Krawitz P; Robinson PN
    Hum Mutat; 2014 May; 35(5):548-55. PubMed ID: 24677618
    [TBL] [Abstract][Full Text] [Related]  

  • 18. OMIGA: Optimized Maker-Based Insect Genome Annotation.
    Liu J; Xiao H; Huang S; Li F
    Mol Genet Genomics; 2014 Aug; 289(4):567-73. PubMed ID: 24609470
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Protein Sequence Annotation Tool (PSAT): a centralized web-based meta-server for high-throughput sequence annotations.
    Leung E; Huang A; Cadag E; Montana A; Soliman JL; Zhou CL
    BMC Bioinformatics; 2016 Jan; 17():43. PubMed ID: 26792120
    [TBL] [Abstract][Full Text] [Related]  

  • 20. MG-RAST, a Metagenomics Service for Analysis of Microbial Community Structure and Function.
    Keegan KP; Glass EM; Meyer F
    Methods Mol Biol; 2016; 1399():207-33. PubMed ID: 26791506
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.