These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

207 related articles for article (PubMed ID: 30445601)

  • 1. RNAct: Protein-RNA interaction predictions for model organisms with supporting experimental data.
    Lang B; Armaos A; Tartaglia GG
    Nucleic Acids Res; 2019 Jan; 47(D1):D601-D606. PubMed ID: 30445601
    [TBL] [Abstract][Full Text] [Related]  

  • 2. catRAPID omics: a web server for large-scale prediction of protein-RNA interactions.
    Agostini F; Zanzoni A; Klus P; Marchese D; Cirillo D; Tartaglia GG
    Bioinformatics; 2013 Nov; 29(22):2928-30. PubMed ID: 23975767
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Computational Prediction of RNA-Protein Interactions.
    Mann CM; Muppirala UK; Dobbs D
    Methods Mol Biol; 2017; 1543():169-185. PubMed ID: 28349426
    [TBL] [Abstract][Full Text] [Related]  

  • 4. catRAPID omics v2.0: going deeper and wider in the prediction of protein-RNA interactions.
    Armaos A; Colantoni A; Proietti G; Rupert J; Tartaglia GG
    Nucleic Acids Res; 2021 Jul; 49(W1):W72-W79. PubMed ID: 34086933
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Investigation of protein-RNA interactions by mass spectrometry--Techniques and applications.
    Schmidt C; Kramer K; Urlaub H
    J Proteomics; 2012 Jun; 75(12):3478-94. PubMed ID: 22575267
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A Novel Method to Quantify RNA-Protein Interactions In Situ Using FMTRIP and Proximity Ligation.
    Zurla C; Jung J; Blanchard EL; Santangelo PJ
    Methods Mol Biol; 2017; 1468():155-70. PubMed ID: 27662876
    [TBL] [Abstract][Full Text] [Related]  

  • 7. omiXcore: a web server for prediction of protein interactions with large RNA.
    Armaos A; Cirillo D; Gaetano Tartaglia G
    Bioinformatics; 2017 Oct; 33(19):3104-3106. PubMed ID: 28637296
    [TBL] [Abstract][Full Text] [Related]  

  • 8. SONAR Discovers RNA-Binding Proteins from Analysis of Large-Scale Protein-Protein Interactomes.
    Brannan KW; Jin W; Huelga SC; Banks CA; Gilmore JM; Florens L; Washburn MP; Van Nostrand EL; Pratt GA; Schwinn MK; Daniels DL; Yeo GW
    Mol Cell; 2016 Oct; 64(2):282-293. PubMed ID: 27720645
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Strengths and weaknesses of data-driven docking in critical assessment of prediction of interactions.
    de Vries SJ; Melquiond AS; Kastritis PL; Karaca E; Bordogna A; van Dijk M; Rodrigues JP; Bonvin AM
    Proteins; 2010 Nov; 78(15):3242-9. PubMed ID: 20718048
    [TBL] [Abstract][Full Text] [Related]  

  • 10. CLIPdb: a CLIP-seq database for protein-RNA interactions.
    Yang YC; Di C; Hu B; Zhou M; Liu Y; Song N; Li Y; Umetsu J; Lu ZJ
    BMC Genomics; 2015 Feb; 16(1):51. PubMed ID: 25652745
    [TBL] [Abstract][Full Text] [Related]  

  • 11. IIIDB: a database for isoform-isoform interactions and isoform network modules.
    Tseng YT; Li W; Chen CH; Zhang S; Chen JJ; Zhou X; Liu CC
    BMC Genomics; 2015; 16 Suppl 2(Suppl 2):S10. PubMed ID: 25707505
    [TBL] [Abstract][Full Text] [Related]  

  • 12. idenPC-CAP: Identify protein complexes from weighted RNA-protein heterogeneous interaction networks using co-assemble partner relation.
    Wu Z; Liao Q; Fan S; Liu B
    Brief Bioinform; 2021 Jul; 22(4):. PubMed ID: 33333549
    [TBL] [Abstract][Full Text] [Related]  

  • 13. RPI-Pred: predicting ncRNA-protein interaction using sequence and structural information.
    Suresh V; Liu L; Adjeroh D; Zhou X
    Nucleic Acids Res; 2015 Feb; 43(3):1370-9. PubMed ID: 25609700
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Recent methodology progress of deep learning for RNA-protein interaction prediction.
    Pan X; Yang Y; Xia CQ; Mirza AH; Shen HB
    Wiley Interdiscip Rev RNA; 2019 Nov; 10(6):e1544. PubMed ID: 31067608
    [TBL] [Abstract][Full Text] [Related]  

  • 15. CONSRANK: a server for the analysis, comparison and ranking of docking models based on inter-residue contacts.
    Chermak E; Petta A; Serra L; Vangone A; Scarano V; Cavallo L; Oliva R
    Bioinformatics; 2015 May; 31(9):1481-3. PubMed ID: 25535242
    [TBL] [Abstract][Full Text] [Related]  

  • 16. ChiTaRS-3.1-the enhanced chimeric transcripts and RNA-seq database matched with protein-protein interactions.
    Gorohovski A; Tagore S; Palande V; Malka A; Raviv-Shay D; Frenkel-Morgenstern M
    Nucleic Acids Res; 2017 Jan; 45(D1):D790-D795. PubMed ID: 27899596
    [TBL] [Abstract][Full Text] [Related]  

  • 17. APID database: redefining protein-protein interaction experimental evidences and binary interactomes.
    Alonso-López D; Campos-Laborie FJ; Gutiérrez MA; Lambourne L; Calderwood MA; Vidal M; De Las Rivas J
    Database (Oxford); 2019 Jan; 2019():. PubMed ID: 30715274
    [TBL] [Abstract][Full Text] [Related]  

  • 18. MotifMap-RNA: a genome-wide map of RBP binding sites.
    Liu Y; Sun S; Bredy T; Wood M; Spitale RC; Baldi P
    Bioinformatics; 2017 Jul; 33(13):2029-2031. PubMed ID: 28334276
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Design and bioinformatics analysis of genome-wide CLIP experiments.
    Wang T; Xiao G; Chu Y; Zhang MQ; Corey DR; Xie Y
    Nucleic Acids Res; 2015 Jun; 43(11):5263-74. PubMed ID: 25958398
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Computational Prediction of RNA-Binding Proteins and Binding Sites.
    Si J; Cui J; Cheng J; Wu R
    Int J Mol Sci; 2015 Nov; 16(11):26303-17. PubMed ID: 26540053
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.