These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

203 related articles for article (PubMed ID: 30455357)

  • 1. Computational approaches for the analysis of RNA-protein interactions: A primer for biologists.
    Moore KS; 't Hoen PAC
    J Biol Chem; 2019 Jan; 294(1):1-9. PubMed ID: 30455357
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Computational Prediction of RNA-Binding Proteins and Binding Sites.
    Si J; Cui J; Cheng J; Wu R
    Int J Mol Sci; 2015 Nov; 16(11):26303-17. PubMed ID: 26540053
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Computational Analysis of RNA-Protein Interactions via Deep Sequencing.
    Li L; Förstner KU; Chao Y
    Methods Mol Biol; 2018; 1751():171-182. PubMed ID: 29508297
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Computational Identification of Post Translational Modification Regulated RNA Binding Protein Motifs.
    Brown AS; Mohanty BK; Howe PH
    PLoS One; 2015; 10(9):e0137696. PubMed ID: 26368004
    [TBL] [Abstract][Full Text] [Related]  

  • 5. SONAR Discovers RNA-Binding Proteins from Analysis of Large-Scale Protein-Protein Interactomes.
    Brannan KW; Jin W; Huelga SC; Banks CA; Gilmore JM; Florens L; Washburn MP; Van Nostrand EL; Pratt GA; Schwinn MK; Daniels DL; Yeo GW
    Mol Cell; 2016 Oct; 64(2):282-293. PubMed ID: 27720645
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Recent methodology progress of deep learning for RNA-protein interaction prediction.
    Pan X; Yang Y; Xia CQ; Mirza AH; Shen HB
    Wiley Interdiscip Rev RNA; 2019 Nov; 10(6):e1544. PubMed ID: 31067608
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PRAS: Predicting functional targets of RNA binding proteins based on CLIP-seq peaks.
    Lin J; Zhang Y; Frankel WN; Ouyang Z
    PLoS Comput Biol; 2019 Aug; 15(8):e1007227. PubMed ID: 31425505
    [TBL] [Abstract][Full Text] [Related]  

  • 8. PAR-CLIP for Discovering Target Sites of RNA-Binding Proteins.
    Garzia A; Morozov P; Sajek M; Meyer C; Tuschl T
    Methods Mol Biol; 2018; 1720():55-75. PubMed ID: 29236251
    [TBL] [Abstract][Full Text] [Related]  

  • 9. RNA-protein binding motifs mining with a new hybrid deep learning based cross-domain knowledge integration approach.
    Pan X; Shen HB
    BMC Bioinformatics; 2017 Feb; 18(1):136. PubMed ID: 28245811
    [TBL] [Abstract][Full Text] [Related]  

  • 10. A deep learning framework for modeling structural features of RNA-binding protein targets.
    Zhang S; Zhou J; Hu H; Gong H; Chen L; Cheng C; Zeng J
    Nucleic Acids Res; 2016 Feb; 44(4):e32. PubMed ID: 26467480
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Discovery of Allele-Specific Protein-RNA Interactions in Human Transcriptomes.
    Bahrami-Samani E; Xing Y
    Am J Hum Genet; 2019 Mar; 104(3):492-502. PubMed ID: 30827501
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Dissecting the expression relationships between RNA-binding proteins and their cognate targets in eukaryotic post-transcriptional regulatory networks.
    Nishtala S; Neelamraju Y; Janga SC
    Sci Rep; 2016 May; 6():25711. PubMed ID: 27161996
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A deep boosting based approach for capturing the sequence binding preferences of RNA-binding proteins from high-throughput CLIP-seq data.
    Li S; Dong F; Wu Y; Zhang S; Zhang C; Liu X; Jiang T; Zeng J
    Nucleic Acids Res; 2017 Aug; 45(14):e129. PubMed ID: 28575488
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Computational Prediction of RNA-Protein Interactions.
    Mann CM; Muppirala UK; Dobbs D
    Methods Mol Biol; 2017; 1543():169-185. PubMed ID: 28349426
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RNA-centric approaches to study RNA-protein interactions in vitro and in silico.
    Dasti A; Cid-Samper F; Bechara E; Tartaglia GG
    Methods; 2020 Jun; 178():11-18. PubMed ID: 31563541
    [TBL] [Abstract][Full Text] [Related]  

  • 16. RNA Bind-n-Seq: Measuring the Binding Affinity Landscape of RNA-Binding Proteins.
    Lambert NJ; Robertson AD; Burge CB
    Methods Enzymol; 2015; 558():465-493. PubMed ID: 26068750
    [TBL] [Abstract][Full Text] [Related]  

  • 17. RBPMetaDB: a comprehensive annotation of mouse RNA-Seq datasets with perturbations of RNA-binding proteins.
    Li J; Deng SP; Vieira J; Thomas J; Costa V; Tseng CS; Ivankovic F; Ciccodicola A; Yu P
    Database (Oxford); 2018 Jan; 2018():. PubMed ID: 29931156
    [TBL] [Abstract][Full Text] [Related]  

  • 18. RNA-binding residues in sequence space: conservation and interaction patterns.
    Spriggs RV; Jones S
    Comput Biol Chem; 2009 Oct; 33(5):397-403. PubMed ID: 19700370
    [TBL] [Abstract][Full Text] [Related]  

  • 19. omniCLIP: probabilistic identification of protein-RNA interactions from CLIP-seq data.
    Drewe-Boss P; Wessels HH; Ohler U
    Genome Biol; 2018 Nov; 19(1):183. PubMed ID: 30384847
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Integrated structural biology to unravel molecular mechanisms of protein-RNA recognition.
    Schlundt A; Tants JN; Sattler M
    Methods; 2017 Apr; 118-119():119-136. PubMed ID: 28315749
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.