BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

587 related articles for article (PubMed ID: 30486782)

  • 1. Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics.
    Baichoo S; Souilmi Y; Panji S; Botha G; Meintjes A; Hazelhurst S; Bendou H; Beste E; Mpangase PT; Souiai O; Alghali M; Yi L; O'Connor BD; Crusoe M; Armstrong D; Aron S; Joubert F; Ahmed AE; Mbiyavanga M; Heusden PV; Magosi LE; Zermeno J; Mainzer LS; Fadlelmola FM; Jongeneel CV; Mulder N
    BMC Bioinformatics; 2018 Nov; 19(1):457. PubMed ID: 30486782
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Development of Bioinformatics Infrastructure for Genomics Research.
    Mulder NJ; Adebiyi E; Adebiyi M; Adeyemi S; Ahmed A; Ahmed R; Akanle B; Alibi M; Armstrong DL; Aron S; Ashano E; Baichoo S; Benkahla A; Brown DK; Chimusa ER; Fadlelmola FM; Falola D; Fatumo S; Ghedira K; Ghouila A; Hazelhurst S; Isewon I; Jung S; Kassim SK; Kayondo JK; Mbiyavanga M; Meintjes A; Mohammed S; Mosaku A; Moussa A; Muhammd M; Mungloo-Dilmohamud Z; Nashiru O; Odia T; Okafor A; Oladipo O; Osamor V; Oyelade J; Sadki K; Salifu SP; Soyemi J; Panji S; Radouani F; Souiai O; Tastan Bishop Ö;
    Glob Heart; 2017 Jun; 12(2):91-98. PubMed ID: 28302555
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Organizing and running bioinformatics hackathons within Africa: The H3ABioNet cloud computing experience.
    Ahmed AE; Mpangase PT; Panji S; Baichoo S; Souilmi Y; Fadlelmola FM; Alghali M; Aron S; Bendou H; De Beste E; Mbiyavanga M; Souiai O; Yi L; Zermeno J; Armstrong D; O'Connor BD; Mainzer LS; Crusoe MR; Meintjes A; Van Heusden P; Botha G; Joubert F; Jongeneel CV; Hazelhurst S; Mulder N
    AAS Open Res; 2018; 1():9. PubMed ID: 32382696
    [TBL] [Abstract][Full Text] [Related]  

  • 4. H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa.
    Mulder NJ; Adebiyi E; Alami R; Benkahla A; Brandful J; Doumbia S; Everett D; Fadlelmola FM; Gaboun F; Gaseitsiwe S; Ghazal H; Hazelhurst S; Hide W; Ibrahimi A; Jaufeerally Fakim Y; Jongeneel CV; Joubert F; Kassim S; Kayondo J; Kumuthini J; Lyantagaye S; Makani J; Mansour Alzohairy A; Masiga D; Moussa A; Nash O; Ouwe Missi Oukem-Boyer O; Owusu-Dabo E; Panji S; Patterton H; Radouani F; Sadki K; Seghrouchni F; Tastan Bishop Ö; Tiffin N; Ulenga N;
    Genome Res; 2016 Feb; 26(2):271-7. PubMed ID: 26627985
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network.
    Jongeneel CV; Achinike-Oduaran O; Adebiyi E; Adebiyi M; Adeyemi S; Akanle B; Aron S; Ashano E; Bendou H; Botha G; Chimusa E; Choudhury A; Donthu R; Drnevich J; Falola O; Fields CJ; Hazelhurst S; Hendry L; Isewon I; Khetani RS; Kumuthini J; Kimuda MP; Magosi L; Mainzer LS; Maslamoney S; Mbiyavanga M; Meintjes A; Mugutso D; Mpangase P; Munthali R; Nembaware V; Ndhlovu A; Odia T; Okafor A; Oladipo O; Panji S; Pillay V; Rendon G; Sengupta D; Mulder N
    PLoS Comput Biol; 2017 Jun; 13(6):e1005419. PubMed ID: 28570565
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Genomics and bioinformatics capacity in Africa: no continent is left behind.
    Mboowa G; Sserwadda I; Aruhomukama D
    Genome; 2021 May; 64(5):503-513. PubMed ID: 33433259
    [TBL] [Abstract][Full Text] [Related]  

  • 7. The H3ABioNet helpdesk: an online bioinformatics resource, enhancing Africa's capacity for genomics research.
    Kumuthini J; Zass L; Panji S; Salifu SP; Kayondo JK; Nembaware V; Mbiyavanga M; Olabode A; Kishk A; Wells G; Mulder NJ;
    BMC Bioinformatics; 2019 Dec; 20(1):741. PubMed ID: 31888443
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Scalable Workflows and Reproducible Data Analysis for Genomics.
    Strozzi F; Janssen R; Wurmus R; Crusoe MR; Githinji G; Di Tommaso P; Belhachemi D; Möller S; Smant G; de Ligt J; Prins P
    Methods Mol Biol; 2019; 1910():723-745. PubMed ID: 31278683
    [TBL] [Abstract][Full Text] [Related]  

  • 9. ILIAD: a suite of automated Snakemake workflows for processing genomic data for downstream applications.
    Herrick N; Walsh S
    BMC Bioinformatics; 2023 Nov; 24(1):424. PubMed ID: 37940870
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Developing expertise in bioinformatics for biomedical research in Africa.
    Karikari TK; Quansah E; Mohamed WM
    Appl Transl Genom; 2015 Sep; 6():31-34. PubMed ID: 26767162
    [TBL] [Abstract][Full Text] [Related]  

  • 11. H3ABioNet genomic medicine and microbiome data portals hackathon proceedings.
    Fadlelmola FM; Ghedira K; Hamdi Y; Hanachi M; Radouani F; Allali I; Kiran A; Zass L; Alsayed N; Fassatoui M; Samtal C; Ahmed S; Da Rocha J; Chaqsare S; Sallam RM; Chaouch M; Farahat M; Ssekagiri A; Parker Z; Adil M; Turkson M; Benchaalia A; Benkahla A; Panji S; Kassim S; Souiai O; Mulder N
    Database (Oxford); 2021 Apr; 2021():. PubMed ID: 33864455
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Building Skills and Resources for Genomics, Epigenetics, and Bioinformatics Research for Africa: Report of the Joint 11th Conference of the African Society of Human Genetics and 12th H3Africa Consortium, 2018.
    Musanabaganwa C; Mihigo B; Tumusime R; Uwanyirigira M; da Rocha J; Hayat M; Govender M; Buto P; Nyunga T; Ramesar RS; Rotimi C; Souopgui J; Wonkam A; Williams SM; Jansen S; Ramsay M; Mutesa L
    Am J Trop Med Hyg; 2020 Jun; 102(6):1417-1424. PubMed ID: 32207403
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Accumulating computational resource usage of genomic data analysis workflow to optimize cloud computing instance selection.
    Ohta T; Tanjo T; Ogasawara O
    Gigascience; 2019 Apr; 8(4):. PubMed ID: 31222199
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Building Portable and Reproducible Cancer Informatics Workflows: An RNA Sequencing Case Study.
    Kaushik G; Davis-Dusenbery B
    Methods Mol Biol; 2019; 1878():39-64. PubMed ID: 30378068
    [TBL] [Abstract][Full Text] [Related]  

  • 15. H3Africa and the African life sciences ecosystem: building sustainable innovation.
    Dandara C; Huzair F; Borda-Rodriguez A; Chirikure S; Okpechi I; Warnich L; Masimirembwa C
    OMICS; 2014 Dec; 18(12):733-9. PubMed ID: 25454511
    [TBL] [Abstract][Full Text] [Related]  

  • 16. H3Africa: a tipping point for a revolution in bioinformatics, genomics and health research in Africa.
    Adoga MP; Fatumo SA; Agwale SM
    Source Code Biol Med; 2014; 9():10. PubMed ID: 24829612
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Managing genomic variant calling workflows with Swift/T.
    Ahmed AE; Heldenbrand J; Asmann Y; Fadlelmola FM; Katz DS; Kendig K; Kendzior MC; Li T; Ren Y; Rodriguez E; Weber MR; Wozniak JM; Zermeno J; Mainzer LS
    PLoS One; 2019; 14(7):e0211608. PubMed ID: 31287816
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Reproducible bioinformatics project: a community for reproducible bioinformatics analysis pipelines.
    Kulkarni N; Alessandrì L; Panero R; Arigoni M; Olivero M; Ferrero G; Cordero F; Beccuti M; Calogero RA
    BMC Bioinformatics; 2018 Oct; 19(Suppl 10):349. PubMed ID: 30367595
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Investigating reproducibility and tracking provenance - A genomic workflow case study.
    Kanwal S; Khan FZ; Lonie A; Sinnott RO
    BMC Bioinformatics; 2017 Jul; 18(1):337. PubMed ID: 28701218
    [TBL] [Abstract][Full Text] [Related]  

  • 20. The eBioKit, a stand-alone educational platform for bioinformatics.
    Hernández-de-Diego R; de Villiers EP; Klingström T; Gourlé H; Conesa A; Bongcam-Rudloff E
    PLoS Comput Biol; 2017 Sep; 13(9):e1005616. PubMed ID: 28910280
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 30.