These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

437 related articles for article (PubMed ID: 30534599)

  • 21. To compare the performance of prokaryotic taxonomy classifiers using curated 16S full-length rRNA sequences.
    Hung YM; Lyu WN; Tsai ML; Liu CL; Lai LC; Tsai MH; Chuang EY
    Comput Biol Med; 2022 Jun; 145():105416. PubMed ID: 35313206
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Generation of Comprehensive Ecosystem-Specific Reference Databases with Species-Level Resolution by High-Throughput Full-Length 16S rRNA Gene Sequencing and Automated Taxonomy Assignment (AutoTax).
    Dueholm MS; Andersen KS; McIlroy SJ; Kristensen JM; Yashiro E; Karst SM; Albertsen M; Nielsen PH
    mBio; 2020 Sep; 11(5):. PubMed ID: 32963001
    [TBL] [Abstract][Full Text] [Related]  

  • 23. MiDAS 3: An ecosystem-specific reference database, taxonomy and knowledge platform for activated sludge and anaerobic digesters reveals species-level microbiome composition of activated sludge.
    Nierychlo M; Andersen KS; Xu Y; Green N; Jiang C; Albertsen M; Dueholm MS; Nielsen PH
    Water Res; 2020 Sep; 182():115955. PubMed ID: 32777640
    [TBL] [Abstract][Full Text] [Related]  

  • 24. The canine oral microbiome.
    Dewhirst FE; Klein EA; Thompson EC; Blanton JM; Chen T; Milella L; Buckley CM; Davis IJ; Bennett ML; Marshall-Jones ZV
    PLoS One; 2012; 7(4):e36067. PubMed ID: 22558330
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Comparative Analysis of Primers Used for 16S rRNA Gene Sequencing in Oral Microbiome Studies.
    Na HS; Song Y; Yu Y; Chung J
    Methods Protoc; 2023 Aug; 6(4):. PubMed ID: 37623922
    [TBL] [Abstract][Full Text] [Related]  

  • 26. A 16S rRNA Gene and Draft Genome Database for the Murine Oral Bacterial Community.
    Joseph S; Aduse-Opoku J; Hashim A; Hanski E; Streich R; Knowles SCL; Pedersen AB; Wade WG; Curtis MA
    mSystems; 2021 Feb; 6(1):. PubMed ID: 33563782
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Cultivation-independent genomes greatly expand taxonomic-profiling capabilities of mOTUs across various environments.
    Ruscheweyh HJ; Milanese A; Paoli L; Karcher N; Clayssen Q; Keller MI; Wirbel J; Bork P; Mende DR; Zeller G; Sunagawa S
    Microbiome; 2022 Dec; 10(1):212. PubMed ID: 36464731
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Analysis of the upper respiratory tract microbiotas as the source of the lung and gastric microbiotas in healthy individuals.
    Bassis CM; Erb-Downward JR; Dickson RP; Freeman CM; Schmidt TM; Young VB; Beck JM; Curtis JL; Huffnagle GB
    mBio; 2015 Mar; 6(2):e00037. PubMed ID: 25736890
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Primer, Pipelines, Parameters: Issues in 16S rRNA Gene Sequencing.
    Abellan-Schneyder I; Matchado MS; Reitmeier S; Sommer A; Sewald Z; Baumbach J; List M; Neuhaus K
    mSphere; 2021 Feb; 6(1):. PubMed ID: 33627512
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Oligotyping analysis of the human oral microbiome.
    Eren AM; Borisy GG; Huse SM; Mark Welch JL
    Proc Natl Acad Sci U S A; 2014 Jul; 111(28):E2875-84. PubMed ID: 24965363
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Design of 16S rRNA gene primers for 454 pyrosequencing of the human foregut microbiome.
    Nossa CW; Oberdorf WE; Yang L; Aas JA; Paster BJ; Desantis TZ; Brodie EL; Malamud D; Poles MA; Pei Z
    World J Gastroenterol; 2010 Sep; 16(33):4135-44. PubMed ID: 20806429
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Metataxonomic insights in the distribution of Lactobacillaceae in foods and food environments.
    Parente E; Zotta T; Giavalisco M; Ricciardi A
    Int J Food Microbiol; 2023 Apr; 391-393():110124. PubMed ID: 36841075
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Genomic Stability and Genetic Defense Systems in
    Flores Ramos S; Brugger SD; Escapa IF; Skeete CA; Cotton SL; Eslami SM; Gao W; Bomar L; Tran TH; Jones DS; Minot S; Roberts RJ; Johnston CD; Lemon KP
    mSystems; 2021 Oct; 6(5):e0042521. PubMed ID: 34546072
    [TBL] [Abstract][Full Text] [Related]  

  • 34. An accurate and efficient experimental approach for characterization of the complex oral microbiota.
    Zheng W; Tsompana M; Ruscitto A; Sharma A; Genco R; Sun Y; Buck MJ
    Microbiome; 2015 Oct; 3():48. PubMed ID: 26437933
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy.
    Zhu Q; Huang S; Gonzalez A; McGrath I; McDonald D; Haiminen N; Armstrong G; Vázquez-Baeza Y; Yu J; Kuczynski J; Sepich-Poore GD; Swafford AD; Das P; Shaffer JP; Lejzerowicz F; Belda-Ferre P; Havulinna AS; Méric G; Niiranen T; Lahti L; Salomaa V; Kim HC; Jain M; Inouye M; Gilbert JA; Knight R
    mSystems; 2022 Apr; 7(2):e0016722. PubMed ID: 35369727
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy.
    Wang Q; Garrity GM; Tiedje JM; Cole JR
    Appl Environ Microbiol; 2007 Aug; 73(16):5261-7. PubMed ID: 17586664
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Oral ecological environment modifications by hard-cheese: from pH to microbiome: a prospective cohort study based on 16S rRNA metabarcoding approach.
    Lorenzini EC; Lazzari B; Tartaglia GM; Farronato G; Lanteri V; Botti S; Biscarini F; Cozzi P; Stella A
    J Transl Med; 2022 Jul; 20(1):312. PubMed ID: 35810305
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Characterization of the nasopharyngeal microbiome in patients with Kawasaki disease.
    Sánchez-Manubens J; Henares D; Muñoz-Almagro C; Brotons de Los Reyes P; Timoneda N; Antón J
    An Pediatr (Engl Ed); 2022 Nov; 97(5):300-309. PubMed ID: 36241544
    [TBL] [Abstract][Full Text] [Related]  

  • 39. 16S-ITGDB: An Integrated Database for Improving Species Classification of Prokaryotic 16S Ribosomal RNA Sequences.
    Hsieh YP; Hung YM; Tsai MH; Lai LC; Chuang EY
    Front Bioinform; 2022; 2():905489. PubMed ID: 36304264
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Towards the human nasal microbiome: Simulating
    Mostolizadeh R; Glöckler M; Dräger A
    Front Cell Infect Microbiol; 2022; 12():925215. PubMed ID: 36605126
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 22.