These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

321 related articles for article (PubMed ID: 30539546)

  • 1. HAMR: High-Throughput Annotation of Modified Ribonucleotides.
    Vandivier LE; Anderson ZD; Gregory BD
    Methods Mol Biol; 2019; 1870():51-67. PubMed ID: 30539546
    [TBL] [Abstract][Full Text] [Related]  

  • 2. In Silico Identification of RNA Modifications from High-Throughput Sequencing Data Using HAMR.
    Kuksa PP; Leung YY; Vandivier LE; Anderson Z; Gregory BD; Wang LS
    Methods Mol Biol; 2017; 1562():211-229. PubMed ID: 28349463
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Reading the Epitranscriptome: New Techniques and Perspectives.
    Vandivier LE; Gregory BD
    Enzymes; 2017; 41():269-298. PubMed ID: 28601224
    [TBL] [Abstract][Full Text] [Related]  

  • 4. HAMR: high-throughput annotation of modified ribonucleotides.
    Ryvkin P; Leung YY; Silverman IM; Childress M; Valladares O; Dragomir I; Gregory BD; Wang LS
    RNA; 2013 Dec; 19(12):1684-92. PubMed ID: 24149843
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Next-generation sequencing technologies for detection of modified nucleotides in RNAs.
    Schwartz S; Motorin Y
    RNA Biol; 2017 Sep; 14(9):1124-1137. PubMed ID: 27791472
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Chemical Modifications Mark Alternatively Spliced and Uncapped Messenger RNAs in Arabidopsis.
    Vandivier LE; Campos R; Kuksa PP; Silverman IM; Wang LS; Gregory BD
    Plant Cell; 2015 Nov; 27(11):3024-37. PubMed ID: 26561561
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Statistical Methods for Transcriptome-Wide Analysis of RNA Methylation by Bisulfite Sequencing.
    Parker BJ
    Methods Mol Biol; 2017; 1562():155-167. PubMed ID: 28349460
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Understanding RNA modifications: the promises and technological bottlenecks of the 'epitranscriptome'.
    Schaefer M; Kapoor U; Jantsch MF
    Open Biol; 2017 May; 7(5):. PubMed ID: 28566301
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Detecting RNA modifications in the epitranscriptome: predict and validate.
    Helm M; Motorin Y
    Nat Rev Genet; 2017 May; 18(5):275-291. PubMed ID: 28216634
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Epitranscriptomic Mass Spectrometry.
    Wang H; Shnaider FM; Martin E; Chiu NHL
    Methods Mol Biol; 2024; 2822():335-349. PubMed ID: 38907927
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Distinguishing RNA modifications from noise in epitranscriptome maps.
    Grozhik AV; Jaffrey SR
    Nat Chem Biol; 2018 Feb; 14(3):215-225. PubMed ID: 29443978
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Shaping the Bacterial Epitranscriptome-5'-Terminal and Internal RNA Modifications.
    Schauerte M; Pozhydaieva N; Höfer K
    Adv Biol (Weinh); 2021 Aug; 5(8):e2100834. PubMed ID: 34121369
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Epitranscriptome sequencing technologies: decoding RNA modifications.
    Li X; Xiong X; Yi C
    Nat Methods; 2016 Dec; 14(1):23-31. PubMed ID: 28032622
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Quantitative Comparison of Large-Scale DNA Enrichment Sequencing Data.
    Lienhard M; Chavez L
    Methods Mol Biol; 2016; 1418():191-208. PubMed ID: 27008016
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Decoding the Atlas of RNA Modifications from Epitranscriptome Sequencing Data.
    Zhang XQ; Yang JH
    Methods Mol Biol; 2019; 1870():107-124. PubMed ID: 30539550
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Epigenetics and Control of RNAs.
    Maatz H; van Heesch S; Kreuchwig F; Faber A; Adami E; Hubner N; Heinig M
    Methods Mol Biol; 2017; 1488():217-237. PubMed ID: 27933526
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Computational methods for RNA modification detection from nanopore direct RNA sequencing data.
    Furlan M; Delgado-Tejedor A; Mulroney L; Pelizzola M; Novoa EM; Leonardi T
    RNA Biol; 2021 Oct; 18(sup1):31-40. PubMed ID: 34559589
    [TBL] [Abstract][Full Text] [Related]  

  • 18. An Informatics Pipeline for Profiling and Annotating RNA Modifications.
    Liu Q; Lang X; Gregory RI
    Methods Mol Biol; 2021; 2298():15-27. PubMed ID: 34085236
    [TBL] [Abstract][Full Text] [Related]  

  • 19. GRO-seq, A Tool for Identification of Transcripts Regulating Gene Expression.
    Lopes R; Agami R; Korkmaz G
    Methods Mol Biol; 2017; 1543():45-55. PubMed ID: 28349421
    [TBL] [Abstract][Full Text] [Related]  

  • 20. PEA: an integrated R toolkit for plant epitranscriptome analysis.
    Zhai J; Song J; Cheng Q; Tang Y; Ma C
    Bioinformatics; 2018 Nov; 34(21):3747-3749. PubMed ID: 29850798
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 17.