These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

270 related articles for article (PubMed ID: 30539552)

  • 1. Genome-Wide Annotation of circRNAs and Their Alternative Back-Splicing/Splicing with CIRCexplorer Pipeline.
    Dong R; Ma XK; Chen LL; Yang L
    Methods Mol Biol; 2019; 1870():137-149. PubMed ID: 30539552
    [TBL] [Abstract][Full Text] [Related]  

  • 2. CIRCexplorer pipelines for circRNA annotation and quantification from non-polyadenylated RNA-seq datasets.
    Ma XK; Xue W; Chen LL; Yang L
    Methods; 2021 Dec; 196():3-10. PubMed ID: 33588028
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Diverse alternative back-splicing and alternative splicing landscape of circular RNAs.
    Zhang XO; Dong R; Zhang Y; Zhang JL; Luo Z; Zhang J; Chen LL; Yang L
    Genome Res; 2016 Sep; 26(9):1277-87. PubMed ID: 27365365
    [TBL] [Abstract][Full Text] [Related]  

  • 4. CircPrimer: a software for annotating circRNAs and determining the specificity of circRNA primers.
    Zhong S; Wang J; Zhang Q; Xu H; Feng J
    BMC Bioinformatics; 2018 Aug; 19(1):292. PubMed ID: 30075703
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Comparison of circular RNA prediction tools.
    Hansen TB; Venø MT; Damgaard CK; Kjems J
    Nucleic Acids Res; 2016 Apr; 44(6):e58. PubMed ID: 26657634
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Methods for Annotation and Validation of Circular RNAs from RNAseq Data.
    Sharma D; Sehgal P; Hariprakash J; Sivasubbu S; Scaria V
    Methods Mol Biol; 2019; 1912():55-76. PubMed ID: 30635890
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Comprehensive identification of alternative back-splicing in human tissue transcriptomes.
    Zhang P; Zhang XO; Jiang T; Cai L; Huang X; Liu Q; Li D; Lu A; Liu Y; Xue W; Zhang P; Weng Z
    Nucleic Acids Res; 2020 Feb; 48(4):1779-1789. PubMed ID: 31974555
    [TBL] [Abstract][Full Text] [Related]  

  • 8. circMeta: a unified computational framework for genomic feature annotation and differential expression analysis of circular RNAs.
    Chen L; Wang F; Bruggeman EC; Li C; Yao B
    Bioinformatics; 2020 Jan; 36(2):539-545. PubMed ID: 31373611
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Circular RNA Profiling by Illumina Sequencing via Template-Dependent Multiple Displacement Amplification.
    Guria A; Velayudha Vimala Kumar K; Srikakulam N; Krishnamma A; Chanda S; Sharma S; Fan X; Pandi G
    Biomed Res Int; 2019; 2019():2756516. PubMed ID: 30834258
    [TBL] [Abstract][Full Text] [Related]  

  • 10. CIRCpedia v2: An Updated Database for Comprehensive Circular RNA Annotation and Expression Comparison.
    Dong R; Ma XK; Li GW; Yang L
    Genomics Proteomics Bioinformatics; 2018 Aug; 16(4):226-233. PubMed ID: 30172046
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Integrative transcriptome sequencing reveals extensive alternative trans-splicing and cis-backsplicing in human cells.
    Chuang TJ; Chen YJ; Chen CY; Mai TL; Wang YD; Yeh CS; Yang MY; Hsiao YT; Chang TH; Kuo TC; Cho HH; Shen CN; Kuo HC; Lu MY; Chen YH; Hsieh SC; Chiang TW
    Nucleic Acids Res; 2018 Apr; 46(7):3671-3691. PubMed ID: 29385530
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ReCirc: prediction of circRNA expression and function through probe reannotation of non-circRNA microarrays.
    Zhao J; Li X; Guo J; Li M; Zhang J; Ding J; Li S; Tang Z; Qian F; Li Y; Wang Q; Li C; Li E; Xu L
    Mol Omics; 2019 Apr; 15(2):150-163. PubMed ID: 30916068
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Regulation of circRNA biogenesis.
    Chen LL; Yang L
    RNA Biol; 2015; 12(4):381-8. PubMed ID: 25746834
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Identification and characterization of circular RNAs during the sea buckthorn fruit development.
    Zhang G; Diao S; Zhang T; Chen D; He C; Zhang J
    RNA Biol; 2019 Mar; 16(3):354-361. PubMed ID: 30681395
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Detecting circular RNAs: bioinformatic and experimental challenges.
    Szabo L; Salzman J
    Nat Rev Genet; 2016 Oct; 17(11):679-692. PubMed ID: 27739534
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Cardiac circRNAs arise mainly from constitutive exons rather than alternatively spliced exons.
    Aufiero S; van den Hoogenhof MMG; Reckman YJ; Beqqali A; van der Made I; Kluin J; Khan MAF; Pinto YM; Creemers EE
    RNA; 2018 Jun; 24(6):815-827. PubMed ID: 29567830
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.
    Bai Y; Kinne J; Donham B; Jiang F; Ding L; Hassler JR; Kaufman RJ
    BMC Genomics; 2016 Aug; 17 Suppl 7(Suppl 7):503. PubMed ID: 27556805
    [TBL] [Abstract][Full Text] [Related]  

  • 18. SRRM4 Expands the Repertoire of Circular RNAs by Regulating Microexon Inclusion.
    Conn VM; Gabryelska M; Marri S; Stringer BW; Ormsby RJ; Penn T; Poonnoose S; Kichenadasse G; Conn SJ
    Cells; 2020 Nov; 9(11):. PubMed ID: 33207694
    [TBL] [Abstract][Full Text] [Related]  

  • 19. CircRNAFisher: a systematic computational approach for de novo circular RNA identification.
    Jia GY; Wang DL; Xue MZ; Liu YW; Pei YC; Yang YQ; Xu JM; Liang YC; Wang P
    Acta Pharmacol Sin; 2019 Jan; 40(1):55-63. PubMed ID: 30013032
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Computational approaches for circular RNA analysis.
    Jakobi T; Dieterich C
    Wiley Interdiscip Rev RNA; 2019 May; 10(3):e1528. PubMed ID: 30788906
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 14.