BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

315 related articles for article (PubMed ID: 30555503)

  • 1. Statistical and Machine Learning Approaches to Predict Gene Regulatory Networks From Transcriptome Datasets.
    Mochida K; Koda S; Inoue K; Nishii R
    Front Plant Sci; 2018; 9():1770. PubMed ID: 30555503
    [TBL] [Abstract][Full Text] [Related]  

  • 2. MICRAT: a novel algorithm for inferring gene regulatory networks using time series gene expression data.
    Yang B; Xu Y; Maxwell A; Koh W; Gong P; Zhang C
    BMC Syst Biol; 2018 Dec; 12(Suppl 7):115. PubMed ID: 30547796
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Inferring Gene Regulatory Networks From Single-Cell Transcriptomic Data Using Bidirectional RNN.
    Gan Y; Hu X; Zou G; Yan C; Xu G
    Front Oncol; 2022; 12():899825. PubMed ID: 35692809
    [TBL] [Abstract][Full Text] [Related]  

  • 4. AGRN: accurate gene regulatory network inference using ensemble machine learning methods.
    Alawad DM; Katebi A; Kabir MWU; Hoque MT
    Bioinform Adv; 2023; 3(1):vbad032. PubMed ID: 37038446
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A gene regulatory network inference model based on pseudo-siamese network.
    Wang Q; Guo M; Chen J; Duan R
    BMC Bioinformatics; 2023 Apr; 24(1):163. PubMed ID: 37085776
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A hybrid deep learning framework for gene regulatory network inference from single-cell transcriptomic data.
    Zhao M; He W; Tang J; Zou Q; Guo F
    Brief Bioinform; 2022 Mar; 23(2):. PubMed ID: 35062026
    [TBL] [Abstract][Full Text] [Related]  

  • 7. [Study of Algorithms Reconstructing Gene Regulatory Network with Resampling and Conditional Mutual Information].
    Liu F
    Sheng Wu Yi Xue Gong Cheng Xue Za Zhi; 2016 Oct; 33(5):985-90. PubMed ID: 29714955
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Inference of gene networks from gene expression time series using recurrent neural networks and sparse MAP estimation.
    Chen CK
    J Bioinform Comput Biol; 2018 Aug; 16(4):1850009. PubMed ID: 30051742
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Robust discovery of gene regulatory networks from single-cell gene expression data by Causal Inference Using Composition of Transactions.
    Shojaee A; Huang SC
    Brief Bioinform; 2023 Sep; 24(6):. PubMed ID: 37897702
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Computational prediction of gene regulatory networks in plant growth and development.
    Haque S; Ahmad JS; Clark NM; Williams CM; Sozzani R
    Curr Opin Plant Biol; 2019 Feb; 47():96-105. PubMed ID: 30445315
    [TBL] [Abstract][Full Text] [Related]  

  • 11. CLARIFY: cell-cell interaction and gene regulatory network refinement from spatially resolved transcriptomics.
    Bafna M; Li H; Zhang X
    Bioinformatics; 2023 Jun; 39(39 Suppl 1):i484-i493. PubMed ID: 37387180
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Bayesian Data Fusion of Gene Expression and Histone Modification Profiles for Inference of Gene Regulatory Network.
    Chen H; Maduranga DAK; Mundra PA; Zheng J
    IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(2):516-525. PubMed ID: 30207963
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Assessing the Effectiveness of Causality Inference Methods for Gene Regulatory Networks.
    Ahmed SS; Roy S; Kalita J
    IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(1):56-70. PubMed ID: 29994618
    [TBL] [Abstract][Full Text] [Related]  

  • 14. A new asynchronous parallel algorithm for inferring large-scale gene regulatory networks.
    Xiao X; Zhang W; Zou X
    PLoS One; 2015; 10(3):e0119294. PubMed ID: 25807392
    [TBL] [Abstract][Full Text] [Related]  

  • 15. A sparse and decomposed particle swarm optimization for inferring gene regulatory networks based on fuzzy cognitive maps.
    Liu L; Liu J
    J Bioinform Comput Biol; 2019 Aug; 17(4):1950023. PubMed ID: 31617458
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Inference of genetic regulatory networks with regulatory hubs using vector autoregressions and automatic relevance determination with model selections.
    Chen CK
    Stat Appl Genet Mol Biol; 2021 Dec; 20(4-6):121-143. PubMed ID: 34963205
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Inference of gene regulatory networks based on the Light Gradient Boosting Machine.
    Du Z; Zhong X; Wang F; Uversky VN
    Comput Biol Chem; 2022 Dec; 101():107769. PubMed ID: 36182867
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Reconstructing Genetic Regulatory Networks Using Two-Step Algorithms with the Differential Equation Models of Neural Networks.
    Chen CK
    Interdiscip Sci; 2018 Dec; 10(4):823-835. PubMed ID: 28748400
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Accurate determination of causalities in gene regulatory networks by dissecting downstream target genes.
    Jia Z; Zhang X
    Front Genet; 2022; 13():923339. PubMed ID: 36568360
    [TBL] [Abstract][Full Text] [Related]  

  • 20. MKL-GRNI: A parallel multiple kernel learning approach for supervised inference of large-scale gene regulatory networks.
    Wani N; Raza K
    PeerJ Comput Sci; 2021; 7():e363. PubMed ID: 33817013
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 16.