BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

155 related articles for article (PubMed ID: 30561549)

  • 1. ShinyCNV: a Shiny/R application to view and annotate DNA copy number variations.
    Gu Z; Mullighan CG
    Bioinformatics; 2019 Jan; 35(1):126-129. PubMed ID: 30561549
    [TBL] [Abstract][Full Text] [Related]  

  • 2. COKGEN: a software for the identification of rare copy number variation from SNP microarrays.
    Yavaş G; Koyutürk M; Ozsoyoğlu M; Gould MP; Laframboise T
    Pac Symp Biocomput; 2010; ():371-82. PubMed ID: 19908389
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Integrative DNA copy number detection and genotyping from sequencing and array-based platforms.
    Zhou Z; Wang W; Wang LS; Zhang NR
    Bioinformatics; 2018 Jul; 34(14):2349-2355. PubMed ID: 29992253
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Assessing the reproducibility of exome copy number variations predictions.
    Hong CS; Singh LN; Mullikin JC; Biesecker LG
    Genome Med; 2016 Aug; 8(1):82. PubMed ID: 27503473
    [TBL] [Abstract][Full Text] [Related]  

  • 5. aCNViewer: Comprehensive genome-wide visualization of absolute copy number and copy neutral variations.
    Renault V; Tost J; Pichon F; Wang-Renault SF; Letouzé E; Imbeaud S; Zucman-Rossi J; Deleuze JF; How-Kit A
    PLoS One; 2017; 12(12):e0189334. PubMed ID: 29261730
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Integrating genomic correlation structure improves copy number variations detection.
    Luo X; Qin F; Cai G; Xiao F
    Bioinformatics; 2021 Apr; 37(3):312-317. PubMed ID: 32805016
    [TBL] [Abstract][Full Text] [Related]  

  • 7. reconCNV: interactive visualization of copy number data from high-throughput sequencing.
    Chandramohan R; Kakkar N; Roy A; Parsons DW
    Bioinformatics; 2021 May; 37(8):1164-1167. PubMed ID: 32821910
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Joint detection of germline and somatic copy number events in matched tumor-normal sample pairs.
    Liu Y; Liu J; Wang Y
    Bioinformatics; 2019 Dec; 35(23):4955-4961. PubMed ID: 31125057
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Family-Based Benchmarking of Copy Number Variation Detection Software.
    Nutsua ME; Fischer A; Nebel A; Hofmann S; Schreiber S; Krawczak M; Nothnagel M
    PLoS One; 2015; 10(7):e0133465. PubMed ID: 26197066
    [TBL] [Abstract][Full Text] [Related]  

  • 10. CLAMMS: a scalable algorithm for calling common and rare copy number variants from exome sequencing data.
    Packer JS; Maxwell EK; O'Dushlaine C; Lopez AE; Dewey FE; Chernomorsky R; Baras A; Overton JD; Habegger L; Reid JG
    Bioinformatics; 2016 Jan; 32(1):133-5. PubMed ID: 26382196
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A novel copy number variants kernel association test with application to autism spectrum disorders studies.
    Zhan X; Girirajan S; Zhao N; Wu MC; Ghosh D
    Bioinformatics; 2016 Dec; 32(23):3603-3610. PubMed ID: 27497442
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Genome-wide copy number variation (CNV) detection in Nelore cattle reveals highly frequent variants in genome regions harboring QTLs affecting production traits.
    da Silva JM; Giachetto PF; da Silva LO; Cintra LC; Paiva SR; Yamagishi ME; Caetano AR
    BMC Genomics; 2016 Jun; 17():454. PubMed ID: 27297173
    [TBL] [Abstract][Full Text] [Related]  

  • 13. A remark on copy number variation detection methods.
    Li S; Dou X; Gao R; Ge X; Qian M; Wan L
    PLoS One; 2018; 13(4):e0196226. PubMed ID: 29702671
    [TBL] [Abstract][Full Text] [Related]  

  • 14. shinyCircos: an R/Shiny application for interactive creation of Circos plot.
    Yu Y; Ouyang Y; Yao W
    Bioinformatics; 2018 Apr; 34(7):1229-1231. PubMed ID: 29186362
    [TBL] [Abstract][Full Text] [Related]  

  • 15. An evaluation of copy number variation detection tools for cancer using whole exome sequencing data.
    Zare F; Dow M; Monteleone N; Hosny A; Nabavi S
    BMC Bioinformatics; 2017 May; 18(1):286. PubMed ID: 28569140
    [TBL] [Abstract][Full Text] [Related]  

  • 16. CNV-ClinViewer: enhancing the clinical interpretation of large copy-number variants online.
    Macnee M; Pérez-Palma E; Brünger T; Klöckner C; Platzer K; Stefanski A; Montanucci L; Bayat A; Radtke M; Collins RL; Talkowski M; Blankenberg D; Møller RS; Lemke JR; Nothnagel M; May P; Lal D
    Bioinformatics; 2023 May; 39(5):. PubMed ID: 37104749
    [TBL] [Abstract][Full Text] [Related]  

  • 17. An accurate and powerful method for copy number variation detection.
    Xiao F; Luo X; Hao N; Niu YS; Xiao X; Cai G; Amos CI; Zhang H
    Bioinformatics; 2019 Sep; 35(17):2891-2898. PubMed ID: 30649252
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Joint detection of copy number variations in parent-offspring trios.
    Liu Y; Liu J; Lu J; Peng J; Juan L; Zhu X; Li B; Wang Y
    Bioinformatics; 2016 Apr; 32(8):1130-7. PubMed ID: 26644415
    [TBL] [Abstract][Full Text] [Related]  

  • 19. iCopyDAV: Integrated platform for copy number variations-Detection, annotation and visualization.
    Dharanipragada P; Vogeti S; Parekh N
    PLoS One; 2018; 13(4):e0195334. PubMed ID: 29621297
    [TBL] [Abstract][Full Text] [Related]  

  • 20. FishingCNV: a graphical software package for detecting rare copy number variations in exome-sequencing data.
    Shi Y; Majewski J
    Bioinformatics; 2013 Jun; 29(11):1461-2. PubMed ID: 23539306
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.