BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

616 related articles for article (PubMed ID: 30598689)

  • 1. Regulatory chromatin landscape in
    Tannenbaum M; Sarusi-Portuguez A; Krispil R; Schwartz M; Loza O; Benichou JIC; Mosquna A; Hakim O
    Plant Methods; 2018; 14():113. PubMed ID: 30598689
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Optimization of ATAC-seq in wheat seedling roots using INTACT-isolated nuclei.
    Debernardi JM; Burguener G; Bubb K; Liu Q; Queitsch C; Dubcovsky J
    BMC Plant Biol; 2023 May; 23(1):270. PubMed ID: 37211599
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Efficient chromatin accessibility mapping in situ by nucleosome-tethered tagmentation.
    Henikoff S; Henikoff JG; Kaya-Okur HS; Ahmad K
    Elife; 2020 Nov; 9():. PubMed ID: 33191916
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Profiling of chromatin accessibility identifies transcription factor binding sites across the genome of Aspergillus species.
    Huang L; Li X; Dong L; Wang B; Pan L
    BMC Biol; 2021 Sep; 19(1):189. PubMed ID: 34488759
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Changes in chromatin accessibility between Arabidopsis stem cells and mesophyll cells illuminate cell type-specific transcription factor networks.
    Sijacic P; Bajic M; McKinney EC; Meagher RB; Deal RB
    Plant J; 2018 Apr; 94(2):215-231. PubMed ID: 29513366
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Profiling of Accessible Chromatin Regions across Multiple Plant Species and Cell Types Reveals Common Gene Regulatory Principles and New Control Modules.
    Maher KA; Bajic M; Kajala K; Reynoso M; Pauluzzi G; West DA; Zumstein K; Woodhouse M; Bubb K; Dorrity MW; Queitsch C; Bailey-Serres J; Sinha N; Brady SM; Deal RB
    Plant Cell; 2018 Jan; 30(1):15-36. PubMed ID: 29229750
    [TBL] [Abstract][Full Text] [Related]  

  • 7. ATAC-STARR-seq reveals transcription factor-bound activators and silencers across the chromatin accessible human genome.
    Hansen TJ; Hodges E
    Genome Res; 2022 Jul; 32(8):1529-41. PubMed ID: 35858748
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Genome-wide MNase hypersensitivity assay unveils distinct classes of open chromatin associated with H3K27me3 and DNA methylation in Arabidopsis thaliana.
    Zhao H; Zhang W; Zhang T; Lin Y; Hu Y; Fang C; Jiang J
    Genome Biol; 2020 Feb; 21(1):24. PubMed ID: 32014062
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Profiling of chromatin accessibility and identification of general cis-regulatory mechanisms that control two ocular lens differentiation pathways.
    Zhao Y; Zheng D; Cvekl A
    Epigenetics Chromatin; 2019 May; 12(1):27. PubMed ID: 31053165
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Identification of Open Chromatin Regions in Plant Genomes Using ATAC-Seq.
    Bajic M; Maher KA; Deal RB
    Methods Mol Biol; 2018; 1675():183-201. PubMed ID: 29052193
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Isolation of Plant Nuclei Compatible with Microfluidic Single-nucleus ATAC-sequencing.
    Thibivilliers SB; Anderson DK; Libault MY
    Bio Protoc; 2021 Dec; 11(23):e4240. PubMed ID: 35005085
    [TBL] [Abstract][Full Text] [Related]  

  • 12. ATAC-pipe: general analysis of genome-wide chromatin accessibility.
    Zuo Z; Jin Y; Zhang W; Lu Y; Li B; Qu K
    Brief Bioinform; 2019 Sep; 20(5):1934-1943. PubMed ID: 29982337
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Protocol for assaying chromatin accessibility using ATAC-seq in plants.
    Wang FX; Shang GD; Wu LY; Mai YX; Gao J; Xu ZG; Wang JW
    STAR Protoc; 2021 Mar; 2(1):100289. PubMed ID: 33532736
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Mapping Genome-wide Accessible Chromatin in Primary Human T Lymphocytes by ATAC-Seq.
    Grbesa I; Tannenbaum M; Sarusi-Portuguez A; Schwartz M; Hakim O
    J Vis Exp; 2017 Nov; (129):. PubMed ID: 29155775
    [TBL] [Abstract][Full Text] [Related]  

  • 15. The landscape of accessible chromatin in bovine oocytes and early embryos.
    Ming H; Sun J; Pasquariello R; Gatenby L; Herrick JR; Yuan Y; Pinto CR; Bondioli KR; Krisher RL; Jiang Z
    Epigenetics; 2021 Mar; 16(3):300-312. PubMed ID: 32663104
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Single-nucleus RNA and ATAC sequencing reveals the impact of chromatin accessibility on gene expression in Arabidopsis roots at the single-cell level.
    Farmer A; Thibivilliers S; Ryu KH; Schiefelbein J; Libault M
    Mol Plant; 2021 Mar; 14(3):372-383. PubMed ID: 33422696
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genome-wide identification of accessible chromatin regions by ATAC-seq upon induction of the transcription factor bZIP11 in Arabidopsis.
    Hellens AM; Humphreys JL; Fichtner F; Tanurdžić M; Beveridge CA; Barbier FF
    Sci Data; 2023 Jul; 10(1):490. PubMed ID: 37500689
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Characterization of the chromatin accessibility in an Alzheimer's disease (AD) mouse model.
    Wang Y; Zhang X; Song Q; Hou Y; Liu J; Sun Y; Wang P
    Alzheimers Res Ther; 2020 Mar; 12(1):29. PubMed ID: 32293531
    [TBL] [Abstract][Full Text] [Related]  

  • 19. The transcription factor reservoir and chromatin landscape in activated plasmacytoid dendritic cells.
    Mann-Nüttel R; Ali S; Petzsch P; Köhrer K; Alferink J; Scheu S
    BMC Genom Data; 2021 Sep; 22(1):37. PubMed ID: 34544361
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Specific chromatin changes mark lateral organ founder cells in the Arabidopsis inflorescence meristem.
    Frerichs A; Engelhorn J; Altmüller J; Gutierrez-Marcos J; Werr W
    J Exp Bot; 2019 Aug; 70(15):3867-3879. PubMed ID: 31037302
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 31.