These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

481 related articles for article (PubMed ID: 30617820)

  • 21. Worldwide Protein Data Bank validation information: usage and trends.
    Smart OS; Horský V; Gore S; Svobodová Vařeková R; Bendová V; Kleywegt GJ; Velankar S
    Acta Crystallogr D Struct Biol; 2018 Mar; 74(Pt 3):237-244. PubMed ID: 29533231
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Macromolecular structures: Quality assessment and biological interpretation.
    Salunke DM; Nair DT
    IUBMB Life; 2017 Aug; 69(8):563-571. PubMed ID: 28497559
    [TBL] [Abstract][Full Text] [Related]  

  • 23. How Structural Biologists and the Protein Data Bank Contributed to Recent FDA New Drug Approvals.
    Westbrook JD; Burley SK
    Structure; 2019 Feb; 27(2):211-217. PubMed ID: 30595456
    [TBL] [Abstract][Full Text] [Related]  

  • 24. PDB-Dev: a Prototype System for Depositing Integrative/Hybrid Structural Models.
    Burley SK; Kurisu G; Markley JL; Nakamura H; Velankar S; Berman HM; Sali A; Schwede T; Trewhella J
    Structure; 2017 Sep; 25(9):1317-1318. PubMed ID: 28877501
    [TBL] [Abstract][Full Text] [Related]  

  • 25. RCSB Protein Data Bank: powerful new tools for exploring 3D structures of biological macromolecules for basic and applied research and education in fundamental biology, biomedicine, biotechnology, bioengineering and energy sciences.
    Burley SK; Bhikadiya C; Bi C; Bittrich S; Chen L; Crichlow GV; Christie CH; Dalenberg K; Di Costanzo L; Duarte JM; Dutta S; Feng Z; Ganesan S; Goodsell DS; Ghosh S; Green RK; Guranović V; Guzenko D; Hudson BP; Lawson CL; Liang Y; Lowe R; Namkoong H; Peisach E; Persikova I; Randle C; Rose A; Rose Y; Sali A; Segura J; Sekharan M; Shao C; Tao YP; Voigt M; Westbrook JD; Young JY; Zardecki C; Zhuravleva M
    Nucleic Acids Res; 2021 Jan; 49(D1):D437-D451. PubMed ID: 33211854
    [TBL] [Abstract][Full Text] [Related]  

  • 26. On the evolution of the quality of macromolecular models in the PDB.
    Brzezinski D; Dauter Z; Minor W; Jaskolski M
    FEBS J; 2020 Jul; 287(13):2685-2698. PubMed ID: 32311227
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Modeling Biological Complexes Using Integrative Modeling Platform.
    Saltzberg D; Greenberg CH; Viswanath S; Chemmama I; Webb B; Pellarin R; Echeverria I; Sali A
    Methods Mol Biol; 2019; 2022():353-377. PubMed ID: 31396911
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Automated and accurate deposition of structures solved by X-ray diffraction to the Protein Data Bank.
    Yang H; Guranovic V; Dutta S; Feng Z; Berman HM; Westbrook JD
    Acta Crystallogr D Biol Crystallogr; 2004 Oct; 60(Pt 10):1833-9. PubMed ID: 15388930
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Protein structure determination by x-ray crystallography.
    Ilari A; Savino C
    Methods Mol Biol; 2008; 452():63-87. PubMed ID: 18563369
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Announcing the launch of Protein Data Bank China as an Associate Member of the Worldwide Protein Data Bank Partnership.
    Xu W; Velankar S; Patwardhan A; Hoch JC; Burley SK; Kurisu G
    Acta Crystallogr D Struct Biol; 2023 Sep; 79(Pt 9):792-795. PubMed ID: 37561405
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Trendspotting in the Protein Data Bank.
    Berman HM; Coimbatore Narayanan B; Di Costanzo L; Dutta S; Ghosh S; Hudson BP; Lawson CL; Peisach E; Prlić A; Rose PW; Shao C; Yang H; Young J; Zardecki C
    FEBS Lett; 2013 Apr; 587(8):1036-45. PubMed ID: 23337870
    [TBL] [Abstract][Full Text] [Related]  

  • 32. BioMagResBank (BMRB) as a Resource for Structural Biology.
    Romero PR; Kobayashi N; Wedell JR; Baskaran K; Iwata T; Yokochi M; Maziuk D; Yao H; Fujiwara T; Kurusu G; Ulrich EL; Hoch JC; Markley JL
    Methods Mol Biol; 2020; 2112():187-218. PubMed ID: 32006287
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Announcing mandatory submission of PDBx/mmCIF format files for crystallographic depositions to the Protein Data Bank (PDB).
    Adams PD; Afonine PV; Baskaran K; Berman HM; Berrisford J; Bricogne G; Brown DG; Burley SK; Chen M; Feng Z; Flensburg C; Gutmanas A; Hoch JC; Ikegawa Y; Kengaku Y; Krissinel E; Kurisu G; Liang Y; Liebschner D; Mak L; Markley JL; Moriarty NW; Murshudov GN; Noble M; Peisach E; Persikova I; Poon BK; Sobolev OV; Ulrich EL; Velankar S; Vonrhein C; Westbrook J; Wojdyr M; Yokochi M; Young JY
    Acta Crystallogr D Struct Biol; 2019 Apr; 75(Pt 4):451-454. PubMed ID: 30988261
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Assessing PDB macromolecular crystal structure confidence at the individual amino acid residue level.
    Shao C; Bittrich S; Wang S; Burley SK
    Structure; 2022 Oct; 30(10):1385-1394.e3. PubMed ID: 36049478
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Multivariate Analyses of Quality Metrics for Crystal Structures in the PDB Archive.
    Shao C; Yang H; Westbrook JD; Young JY; Zardecki C; Burley SK
    Structure; 2017 Mar; 25(3):458-468. PubMed ID: 28216043
    [TBL] [Abstract][Full Text] [Related]  

  • 36. IHMCIF: An Extension of the PDBx/mmCIF Data Standard for Integrative Structure Determination Methods.
    Vallat B; Webb BM; Westbrook JD; Goddard TD; Hanke CA; Graziadei A; Peisach E; Zalevsky A; Sagendorf J; Tangmunarunkit H; Voinea S; Sekharan M; Yu J; Bonvin AAMJJ; DiMaio F; Hummer G; Meiler J; Tajkhorshid E; Ferrin TE; Lawson CL; Leitner A; Rappsilber J; Seidel CAM; Jeffries CM; Burley SK; Hoch JC; Kurisu G; Morris K; Patwardhan A; Velankar S; Schwede T; Trewhella J; Kesselman C; Berman HM; Sali A
    J Mol Biol; 2024 Mar; ():168546. PubMed ID: 38508301
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Implementing an X-ray validation pipeline for the Protein Data Bank.
    Gore S; Velankar S; Kleywegt GJ
    Acta Crystallogr D Biol Crystallogr; 2012 Apr; 68(Pt 4):478-83. PubMed ID: 22505268
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Electron microscopy holdings of the Protein Data Bank: the impact of the resolution revolution, new validation tools, and implications for the future.
    Burley SK; Berman HM; Chiu W; Dai W; Flatt JW; Hudson BP; Kaelber JT; Khare SD; Kulczyk AW; Lawson CL; Pintilie GD; Sali A; Vallat B; Westbrook JD; Young JY; Zardecki C
    Biophys Rev; 2022 Dec; 14(6):1281-1301. PubMed ID: 36474933
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Homology-based hydrogen bond information improves crystallographic structures in the PDB.
    van Beusekom B; Touw WG; Tatineni M; Somani S; Rajagopal G; Luo J; Gilliland GL; Perrakis A; Joosten RP
    Protein Sci; 2018 Mar; 27(3):798-808. PubMed ID: 29168245
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Continuous mutual improvement of macromolecular structure models in the PDB and of X-ray crystallographic software: the dual role of deposited experimental data.
    Terwilliger TC; Bricogne G
    Acta Crystallogr D Biol Crystallogr; 2014 Oct; 70(Pt 10):2533-43. PubMed ID: 25286839
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 25.