These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

184 related articles for article (PubMed ID: 30652085)

  • 1. PDB_Amyloid: an extended live amyloid structure list from the PDB.
    Takács K; Varga B; Grolmusz V
    FEBS Open Bio; 2019 Jan; 9(1):185-190. PubMed ID: 30652085
    [TBL] [Abstract][Full Text] [Related]  

  • 2. On the border of the amyloidogenic sequences: prefix analysis of the parallel beta sheets in the PDB_Amyloid collection.
    Takács K; Grolmusz V
    J Integr Bioinform; 2021 Jul; 19(1):. PubMed ID: 34303324
    [TBL] [Abstract][Full Text] [Related]  

  • 3. PDB_TM: selection and membrane localization of transmembrane proteins in the protein data bank.
    Tusnády GE; Dosztányi Z; Simon I
    Nucleic Acids Res; 2005 Jan; 33(Database issue):D275-8. PubMed ID: 15608195
    [TBL] [Abstract][Full Text] [Related]  

  • 4. PDB-Explorer: a web-based interactive map of the protein data bank in shape space.
    Jin X; Awale M; Zasso M; Kostro D; Patiny L; Reymond JL
    BMC Bioinformatics; 2015 Oct; 16():339. PubMed ID: 26493835
    [TBL] [Abstract][Full Text] [Related]  

  • 5. PISCES: recent improvements to a PDB sequence culling server.
    Wang G; Dunbrack RL
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W94-8. PubMed ID: 15980589
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Protein knot server: detection of knots in protein structures.
    Kolesov G; Virnau P; Kardar M; Mirny LA
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W425-8. PubMed ID: 17517776
    [TBL] [Abstract][Full Text] [Related]  

  • 7. PSSARD (2.0): a database server for making flexible queries relating amino acid sequences to main-chain secondary structure conformations for proteins of known three-dimensional structure and certain useful applications.
    Sridhar S; Babu AV; Guruprasad K
    Int J Biol Macromol; 2007 Jun; 41(1):109-13. PubMed ID: 17150250
    [TBL] [Abstract][Full Text] [Related]  

  • 8. FATCAT: a web server for flexible structure comparison and structure similarity searching.
    Ye Y; Godzik A
    Nucleic Acids Res; 2004 Jul; 32(Web Server issue):W582-5. PubMed ID: 15215455
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Usage of a dataset of NMR resolved protein structures to test aggregation versus solubility prediction algorithms.
    Roche DB; Villain E; Kajava AV
    Protein Sci; 2017 Sep; 26(9):1864-1869. PubMed ID: 28685932
    [TBL] [Abstract][Full Text] [Related]  

  • 10. PDBsum: Structural summaries of PDB entries.
    Laskowski RA; Jabłońska J; Pravda L; Vařeková RS; Thornton JM
    Protein Sci; 2018 Jan; 27(1):129-134. PubMed ID: 28875543
    [TBL] [Abstract][Full Text] [Related]  

  • 11. The PDB-Preview database: a repository of in-silico models of 'on-hold' PDB entries.
    Fischer D; Paś J; Rychlewski L
    Bioinformatics; 2004 Oct; 20(15):2482-4. PubMed ID: 15073011
    [TBL] [Abstract][Full Text] [Related]  

  • 12. pKNOT: the protein KNOT web server.
    Lai YL; Yen SC; Yu SH; Hwang JK
    Nucleic Acids Res; 2007 Jul; 35(Web Server issue):W420-4. PubMed ID: 17526524
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Mapping PDB chains to UniProtKB entries.
    Martin AC
    Bioinformatics; 2005 Dec; 21(23):4297-301. PubMed ID: 16188924
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Building a structured PDB: the RS-PDB database.
    Szabadka Z; Grolmusz V
    Conf Proc IEEE Eng Med Biol Soc; 2006; 2006():5755-8. PubMed ID: 17945915
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Intrinsic disorder in the Protein Data Bank.
    Le Gall T; Romero PR; Cortese MS; Uversky VN; Dunker AK
    J Biomol Struct Dyn; 2007 Feb; 24(4):325-42. PubMed ID: 17206849
    [TBL] [Abstract][Full Text] [Related]  

  • 16. PDB explorer -- a web based algorithm for protein annotation viewer and 3D visualization.
    Nayarisseri A; Shardiwal RK; Yadav M; Kanungo N; Singh P; Shah P; Ahmed S
    Interdiscip Sci; 2014 Dec; 6(4):279-84. PubMed ID: 25118648
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Protein Repair and Analysis Server: A Web Server to Repair PDB Structures, Add Missing Heavy Atoms and Hydrogen Atoms, and Assign Secondary Structures by Amide Interactions.
    Nnyigide OS; Nnyigide TO; Lee SG; Hyun K
    J Chem Inf Model; 2022 Sep; 62(17):4232-4246. PubMed ID: 36000562
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Using Dali for structural comparison of proteins.
    Holm L; Kääriäinen S; Wilton C; Plewczynski D
    Curr Protoc Bioinformatics; 2006 Jul; Chapter 5():Unit 5.5. PubMed ID: 18428766
    [TBL] [Abstract][Full Text] [Related]  

  • 19. PDBe: Protein Data Bank in Europe.
    Gutmanas A; Alhroub Y; Battle GM; Berrisford JM; Bochet E; Conroy MJ; Dana JM; Fernandez Montecelo MA; van Ginkel G; Gore SP; Haslam P; Hatherley R; Hendrickx PM; Hirshberg M; Lagerstedt I; Mir S; Mukhopadhyay A; Oldfield TJ; Patwardhan A; Rinaldi L; Sahni G; Sanz-García E; Sen S; Slowley RA; Velankar S; Wainwright ME; Kleywegt GJ
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D285-91. PubMed ID: 24288376
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Continuous mutual improvement of macromolecular structure models in the PDB and of X-ray crystallographic software: the dual role of deposited experimental data.
    Terwilliger TC; Bricogne G
    Acta Crystallogr D Biol Crystallogr; 2014 Oct; 70(Pt 10):2533-43. PubMed ID: 25286839
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 10.