BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

402 related articles for article (PubMed ID: 30725469)

  • 1. Integration of Metabolomics and Transcriptomics to Identify Gene-Metabolite Relationships Specific to Phenotype.
    Patt A; Siddiqui J; Zhang B; Mathé E
    Methods Mol Biol; 2019; 1928():441-468. PubMed ID: 30725469
    [TBL] [Abstract][Full Text] [Related]  

  • 2. IntLIM: integration using linear models of metabolomics and gene expression data.
    Siddiqui JK; Baskin E; Liu M; Cantemir-Stone CZ; Zhang B; Bonneville R; McElroy JP; Coombes KR; Mathé EA
    BMC Bioinformatics; 2018 Mar; 19(1):81. PubMed ID: 29506475
    [TBL] [Abstract][Full Text] [Related]  

  • 3. RaMP: A Comprehensive Relational Database of Metabolomics Pathways for Pathway Enrichment Analysis of Genes and Metabolites.
    Zhang B; Hu S; Baskin E; Patt A; Siddiqui JK; Mathé EA
    Metabolites; 2018 Feb; 8(1):. PubMed ID: 29470400
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Using MetaboAnalyst 4.0 for Comprehensive and Integrative Metabolomics Data Analysis.
    Chong J; Wishart DS; Xia J
    Curr Protoc Bioinformatics; 2019 Dec; 68(1):e86. PubMed ID: 31756036
    [TBL] [Abstract][Full Text] [Related]  

  • 5. RaMP-DB 2.0: a renovated knowledgebase for deriving biological and chemical insight from metabolites, proteins, and genes.
    Braisted J; Patt A; Tindall C; Sheils T; Neyra J; Spencer K; Eicher T; Mathé EA
    Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36373969
    [TBL] [Abstract][Full Text] [Related]  

  • 6. ivTerm-An R package for interactive visualization of functional analysis results of meta-omics data.
    Dong X; Xue H; Wei C
    J Cell Biochem; 2021 Oct; 122(10):1428-1434. PubMed ID: 34132422
    [TBL] [Abstract][Full Text] [Related]  

  • 7. MetaboLights: a resource evolving in response to the needs of its scientific community.
    Haug K; Cochrane K; Nainala VC; Williams M; Chang J; Jayaseelan KV; O'Donovan C
    Nucleic Acids Res; 2020 Jan; 48(D1):D440-D444. PubMed ID: 31691833
    [TBL] [Abstract][Full Text] [Related]  

  • 8. multiGSEA: a GSEA-based pathway enrichment analysis for multi-omics data.
    Canzler S; Hackermüller J
    BMC Bioinformatics; 2020 Dec; 21(1):561. PubMed ID: 33287694
    [TBL] [Abstract][Full Text] [Related]  

  • 9. 3Omics: a web-based systems biology tool for analysis, integration and visualization of human transcriptomic, proteomic and metabolomic data.
    Kuo TC; Tian TF; Tseng YJ
    BMC Syst Biol; 2013 Jul; 7():64. PubMed ID: 23875761
    [TBL] [Abstract][Full Text] [Related]  

  • 10. MetaboAnalyst 4.0: towards more transparent and integrative metabolomics analysis.
    Chong J; Soufan O; Li C; Caraus I; Li S; Bourque G; Wishart DS; Xia J
    Nucleic Acids Res; 2018 Jul; 46(W1):W486-W494. PubMed ID: 29762782
    [TBL] [Abstract][Full Text] [Related]  

  • 11. MetaboDiff: an R package for differential metabolomic analysis.
    Mock A; Warta R; Dettling S; Brors B; Jäger D; Herold-Mende C
    Bioinformatics; 2018 Oct; 34(19):3417-3418. PubMed ID: 29718102
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Using MetaboAnalyst 4.0 for Metabolomics Data Analysis, Interpretation, and Integration with Other Omics Data.
    Chong J; Xia J
    Methods Mol Biol; 2020; 2104():337-360. PubMed ID: 31953825
    [TBL] [Abstract][Full Text] [Related]  

  • 13. PRIMe: a Web site that assembles tools for metabolomics and transcriptomics.
    Akiyama K; Chikayama E; Yuasa H; Shimada Y; Tohge T; Shinozaki K; Hirai MY; Sakurai T; Kikuchi J; Saito K
    In Silico Biol; 2008; 8(3-4):339-45. PubMed ID: 19032166
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Metabolome searcher: a high throughput tool for metabolite identification and metabolic pathway mapping directly from mass spectrometry and using genome restriction.
    Dhanasekaran AR; Pearson JL; Ganesan B; Weimer BC
    BMC Bioinformatics; 2015 Feb; 16(1):62. PubMed ID: 25887958
    [TBL] [Abstract][Full Text] [Related]  

  • 15. OmicsON - Integration of omics data with molecular networks and statistical procedures.
    Turek C; Wróbel S; Piwowar M
    PLoS One; 2020; 15(7):e0235398. PubMed ID: 32726348
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Nicotiana attenuata Data Hub (NaDH): an integrative platform for exploring genomic, transcriptomic and metabolomic data in wild tobacco.
    Brockmöller T; Ling Z; Li D; Gaquerel E; Baldwin IT; Xu S
    BMC Genomics; 2017 Jan; 18(1):79. PubMed ID: 28086860
    [TBL] [Abstract][Full Text] [Related]  

  • 17. MetaMapR: pathway independent metabolomic network analysis incorporating unknowns.
    Grapov D; Wanichthanarak K; Fiehn O
    Bioinformatics; 2015 Aug; 31(16):2757-60. PubMed ID: 25847005
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Integration of transcriptomics, proteomics, metabolomics and systems pharmacology data to reveal the therapeutic mechanism underlying Chinese herbal Bufei Yishen formula for the treatment of chronic obstructive pulmonary disease.
    Zhao P; Li J; Yang L; Li Y; Tian Y; Li S
    Mol Med Rep; 2018 Apr; 17(4):5247-5257. PubMed ID: 29393428
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Informatics for Metabolomics.
    Kusonmano K; Vongsangnak W; Chumnanpuen P
    Adv Exp Med Biol; 2016; 939():91-115. PubMed ID: 27807745
    [TBL] [Abstract][Full Text] [Related]  

  • 20.
    ; ; . PubMed ID:
    [No Abstract]   [Full Text] [Related]  

    [Next]    [New Search]
    of 21.