166 related articles for article (PubMed ID: 30747434)
21. Ligand-free open-closed transitions of periplasmic binding proteins: the case of glutamine-binding protein.
Bermejo GA; Strub MP; Ho C; Tjandra N
Biochemistry; 2010 Mar; 49(9):1893-902. PubMed ID: 20141110
[TBL] [Abstract][Full Text] [Related]
22. Analysis of conformational motions and residue fluctuations for Escherichia coli ribose-binding protein revealed with elastic network models.
Li HY; Cao ZX; Zhao LL; Wang JH
Int J Mol Sci; 2013 May; 14(5):10552-69. PubMed ID: 23698778
[TBL] [Abstract][Full Text] [Related]
23. Ligand-induced conformational changes in a thermophilic ribose-binding protein.
Cuneo MJ; Beese LS; Hellinga HW
BMC Struct Biol; 2008 Nov; 8():50. PubMed ID: 19019243
[TBL] [Abstract][Full Text] [Related]
24. In vitro functional characterization of BtuCD-F, the Escherichia coli ABC transporter for vitamin B12 uptake.
Borths EL; Poolman B; Hvorup RN; Locher KP; Rees DC
Biochemistry; 2005 Dec; 44(49):16301-9. PubMed ID: 16331991
[TBL] [Abstract][Full Text] [Related]
25. Ligand-bound glutamine binding protein assumes multiple metastable binding sites with different binding affinities.
Zhang L; Wu S; Feng Y; Wang D; Jia X; Liu Z; Liu J; Wang W
Commun Biol; 2020 Aug; 3(1):419. PubMed ID: 32747735
[TBL] [Abstract][Full Text] [Related]
26. Carbohydrate affinity for the glucose-galactose binding protein is regulated by allosteric domain motions.
Ortega G; Castaño D; Diercks T; Millet O
J Am Chem Soc; 2012 Dec; 134(48):19869-76. PubMed ID: 23148479
[TBL] [Abstract][Full Text] [Related]
27. X-ray structures of the leucine-binding protein illustrate conformational changes and the basis of ligand specificity.
Magnusson U; Salopek-Sondi B; Luck LA; Mowbray SL
J Biol Chem; 2004 Mar; 279(10):8747-52. PubMed ID: 14672931
[TBL] [Abstract][Full Text] [Related]
28. Stability of Ligand-induced Protein Conformation Influences Affinity in Maltose-binding Protein.
van den Noort M; de Boer M; Poolman B
J Mol Biol; 2021 Jul; 433(15):167036. PubMed ID: 33957147
[TBL] [Abstract][Full Text] [Related]
29. Role of the two structural domains from the periplasmic Escherichia coli histidine-binding protein HisJ.
Chu BC; DeWolf T; Vogel HJ
J Biol Chem; 2013 Nov; 288(44):31409-22. PubMed ID: 24036119
[TBL] [Abstract][Full Text] [Related]
30. A Network of Conformational Transitions in the Apo Form of NDM-1 Enzyme Revealed by MD Simulation and a Markov State Model.
Gao K; Zhao Y
J Phys Chem B; 2017 Apr; 121(14):2952-2960. PubMed ID: 28319394
[TBL] [Abstract][Full Text] [Related]
31. An enhanced molecular dynamics study of HPPK-ATP conformation space exploration and ATP binding to HPPK.
Su L; Cukier RI
J Phys Chem A; 2009 Mar; 113(10):2025-35. PubMed ID: 19191740
[TBL] [Abstract][Full Text] [Related]
32. Ligand-induced structural changes analysis of ribose-binding protein as studied by molecular dynamics simulations.
Li H; Cao Z; Hu G; Zhao L; Wang C; Wang J
Technol Health Care; 2021; 29(S1):103-114. PubMed ID: 33682750
[TBL] [Abstract][Full Text] [Related]
33. Molecular dynamics simulations of the periplasmic ferric-hydroxamate binding protein FhuD.
Krewulak KD; Shepherd CM; Vogel HJ
Biometals; 2005 Aug; 18(4):375-86. PubMed ID: 16158230
[TBL] [Abstract][Full Text] [Related]
34. Ligand-free and -bound structures of the binding protein (LivJ) of the Escherichia coli ABC leucine/isoleucine/valine transport system: trajectory and dynamics of the interdomain rotation and ligand specificity.
Trakhanov S; Vyas NK; Luecke H; Kristensen DM; Ma J; Quiocho FA
Biochemistry; 2005 May; 44(17):6597-608. PubMed ID: 15850393
[TBL] [Abstract][Full Text] [Related]
35. Mechanistic basis of vitamin B12 and cobinamide salvaging by the Vibrio species.
Agarwal S; Dey S; Ghosh B; Biswas M; Dasgupta J
Biochim Biophys Acta Proteins Proteom; 2019 Feb; 1867(2):140-151. PubMed ID: 30463026
[TBL] [Abstract][Full Text] [Related]
36. Conformational and dynamics changes induced by bile acids binding to chicken liver bile acid binding protein.
Eberini I; Guerini Rocco A; Ientile AR; Baptista AM; Gianazza E; Tomaselli S; Molinari H; Ragona L
Proteins; 2008 Jun; 71(4):1889-98. PubMed ID: 18175325
[TBL] [Abstract][Full Text] [Related]
37. Investigation of ECD conformational transition mechanism of GLP-1R by molecular dynamics simulations and Markov state model.
Zhang J; Bai Q; Pérez-Sánchez H; Shang S; An X; Yao X
Phys Chem Chem Phys; 2019 Apr; 21(16):8470-8481. PubMed ID: 30957116
[TBL] [Abstract][Full Text] [Related]
38. Structural analysis of the choline-binding protein ChoX in a semi-closed and ligand-free conformation.
Oswald C; Smits SH; Höing M; Bremer E; Schmitt L
Biol Chem; 2009 Nov; 390(11):1163-70. PubMed ID: 19642870
[TBL] [Abstract][Full Text] [Related]
39. Dynamics and function in a bacterial ABC transporter: simulation studies of the BtuCDF system and its components.
Ivetac A; Campbell JD; Sansom MS
Biochemistry; 2007 Mar; 46(10):2767-78. PubMed ID: 17302441
[TBL] [Abstract][Full Text] [Related]
40. Structure-based mechanism of ligand binding for periplasmic solute-binding protein of the Bug family.
Herrou J; Bompard C; Antoine R; Leroy A; Rucktooa P; Hot D; Huvent I; Locht C; Villeret V; Jacob-Dubuisson F
J Mol Biol; 2007 Nov; 373(4):954-64. PubMed ID: 17870093
[TBL] [Abstract][Full Text] [Related]
[Previous] [Next] [New Search]