These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
2127 related articles for article (PubMed ID: 30778233)
1. SignalP 5.0 improves signal peptide predictions using deep neural networks. Almagro Armenteros JJ; Tsirigos KD; Sønderby CK; Petersen TN; Winther O; Brunak S; von Heijne G; Nielsen H Nat Biotechnol; 2019 Apr; 37(4):420-423. PubMed ID: 30778233 [TBL] [Abstract][Full Text] [Related]
2. Predicting Secretory Proteins with SignalP. Nielsen H Methods Mol Biol; 2017; 1611():59-73. PubMed ID: 28451972 [TBL] [Abstract][Full Text] [Related]
3. Prediction of signal peptides in archaea. Bagos PG; Tsirigos KD; Plessas SK; Liakopoulos TD; Hamodrakas SJ Protein Eng Des Sel; 2009 Jan; 22(1):27-35. PubMed ID: 18988691 [TBL] [Abstract][Full Text] [Related]
4. [Computational analysis of signal peptide-dependent secreted protein in Caenorthaditis elegans ws123]. Wu HZ; Li CY; Zhu YY; Bi YF Yi Chuan; 2006 Apr; 28(4):470-8. PubMed ID: 16606602 [TBL] [Abstract][Full Text] [Related]
5. Prediction of signal peptides in protein sequences by neural networks. Plewczynski D; Slabinski L; Ginalski K; Rychlewski L Acta Biochim Pol; 2008; 55(2):261-7. PubMed ID: 18506221 [TBL] [Abstract][Full Text] [Related]
6. SignalP 6.0 predicts all five types of signal peptides using protein language models. Teufel F; Almagro Armenteros JJ; Johansen AR; Gíslason MH; Pihl SI; Tsirigos KD; Winther O; Brunak S; von Heijne G; Nielsen H Nat Biotechnol; 2022 Jul; 40(7):1023-1025. PubMed ID: 34980915 [TBL] [Abstract][Full Text] [Related]
7. [Analysis of signal peptides of the secreted proteins in Ralstonia solanacearum GMI1000]. Huang JL; Wu JZ; Xiao CG; Li CJ; Wang GX Yi Chuan; 2007 Nov; 29(11):1409-16. PubMed ID: 17989054 [TBL] [Abstract][Full Text] [Related]
8. A new mRNA structure prediction based approach to identifying improved signal peptides for bone morphogenetic protein 2. Wilkinson P; Jackson B; Fermor H; Davies R BMC Biotechnol; 2024 May; 24(1):34. PubMed ID: 38783306 [TBL] [Abstract][Full Text] [Related]
9. A comprehensive assessment of N-terminal signal peptides prediction methods. Choo KH; Tan TW; Ranganathan S BMC Bioinformatics; 2009 Dec; 10 Suppl 15(Suppl 15):S2. PubMed ID: 19958512 [TBL] [Abstract][Full Text] [Related]
10. Identification and analysis of a new family of bacterial serine proteinases. Pandit SB; Srinivasan N In Silico Biol; 2004; 4(4):563-72. PubMed ID: 15752073 [TBL] [Abstract][Full Text] [Related]
11. Signal peptidase I processed secretory signal sequences: Selection for and against specific amino acids at the second position of mature protein. Zalucki YM; Jennings MP Biochem Biophys Res Commun; 2017 Feb; 483(3):972-977. PubMed ID: 28088521 [TBL] [Abstract][Full Text] [Related]
12. Evaluation of signal peptide prediction algorithms for identification of mycobacterial signal peptides using sequence data from proteomic methods. Leversen NA; de Souza GA; Målen H; Prasad S; Jonassen I; Wiker HG Microbiology (Reading); 2009 Jul; 155(Pt 7):2375-2383. PubMed ID: 19389770 [TBL] [Abstract][Full Text] [Related]
13. Signal peptide discrimination and cleavage site identification using SVM and NN. Kazemian HB; Yusuf SA; White K Comput Biol Med; 2014 Feb; 45():98-110. PubMed ID: 24480169 [TBL] [Abstract][Full Text] [Related]
14. Detecting and sorting targeting peptides with neural networks and support vector machines. Hawkins J; Bodén M J Bioinform Comput Biol; 2006 Feb; 4(1):1-18. PubMed ID: 16568539 [TBL] [Abstract][Full Text] [Related]
15. Machine learning approaches for the prediction of signal peptides and other protein sorting signals. Nielsen H; Brunak S; von Heijne G Protein Eng; 1999 Jan; 12(1):3-9. PubMed ID: 10065704 [TBL] [Abstract][Full Text] [Related]
16. A neural network method for identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites. Nielsen H; Engelbrecht J; Brunak S; von Heijne G Int J Neural Syst; 1997; 8(5-6):581-99. PubMed ID: 10065837 [TBL] [Abstract][Full Text] [Related]
17. Signal peptide prediction based on analysis of experimentally verified cleavage sites. Zhang Z; Henzel WJ Protein Sci; 2004 Oct; 13(10):2819-24. PubMed ID: 15340161 [TBL] [Abstract][Full Text] [Related]
18. Computational prediction of the functional effects of amino acid substitutions in signal peptides using a model-based approach. Hon LS; Zhang Y; Kaminker JS; Zhang Z Hum Mutat; 2009 Jan; 30(1):99-106. PubMed ID: 18570327 [TBL] [Abstract][Full Text] [Related]
19. Signal peptide optimization tool for the secretion of recombinant protein from Saccharomyces cerevisiae. Mori A; Hara S; Sugahara T; Kojima T; Iwasaki Y; Kawarasaki Y; Sahara T; Ohgiya S; Nakano H J Biosci Bioeng; 2015 Nov; 120(5):518-25. PubMed ID: 25912446 [TBL] [Abstract][Full Text] [Related]
20. A computational study of Shewanella oneidensis MR-1: structural prediction and functional inference of hypothetical proteins. Yost C; Hauser L; Larimer F; Thompson D; Beliaev A; Zhou J; Xu Y; Xu D OMICS; 2003; 7(2):177-91. PubMed ID: 14506847 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]