These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

112 related articles for article (PubMed ID: 30836197)

  • 1. Residue co-evolution helps predict interaction sites in α-helical membrane proteins.
    Zeng B; Hönigschmid P; Frishman D
    J Struct Biol; 2019 May; 206(2):156-169. PubMed ID: 30836197
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Predicting protein-protein binding sites in membrane proteins.
    Bordner AJ
    BMC Bioinformatics; 2009 Sep; 10():312. PubMed ID: 19778442
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Accurate prediction of helix interactions and residue contacts in membrane proteins.
    Hönigschmid P; Frishman D
    J Struct Biol; 2016 Apr; 194(1):112-23. PubMed ID: 26851352
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Marker residue types at the structural regions of transmembrane alpha-helical and beta-barrel interfaces.
    Beytur S
    Proteins; 2021 Sep; 89(9):1145-1157. PubMed ID: 33890696
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Protein-protein interactions leave evolutionary footprints: High molecular coevolution at the core of interfaces.
    Teppa E; Zea DJ; Marino-Buslje C
    Protein Sci; 2017 Dec; 26(12):2438-2444. PubMed ID: 28980349
    [TBL] [Abstract][Full Text] [Related]  

  • 6. CoRNeA: A Pipeline to Decrypt the Inter-Protein Interfaces from Amino Acid Sequence Information.
    Chopra K; Burdak B; Sharma K; Kembhavi A; Mande SC; Chauhan R
    Biomolecules; 2020 Jun; 10(6):. PubMed ID: 32580303
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Prediction of helix-helix contacts and interacting helices in polytopic membrane proteins using neural networks.
    Fuchs A; Kirschner A; Frishman D
    Proteins; 2009 Mar; 74(4):857-71. PubMed ID: 18704938
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Interfaces Between Alpha-helical Integral Membrane Proteins: Characterization, Prediction, and Docking.
    Li B; Mendenhall J; Meiler J
    Comput Struct Biotechnol J; 2019; 17():699-711. PubMed ID: 31303974
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Structure-based prediction of protein- peptide binding regions using Random Forest.
    Taherzadeh G; Zhou Y; Liew AW; Yang Y
    Bioinformatics; 2018 Feb; 34(3):477-484. PubMed ID: 29028926
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Statistical analysis and prediction of protein-protein interfaces.
    Bordner AJ; Abagyan R
    Proteins; 2005 Aug; 60(3):353-66. PubMed ID: 15906321
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Protein binding site prediction using an empirical scoring function.
    Liang S; Zhang C; Liu S; Zhou Y
    Nucleic Acids Res; 2006; 34(13):3698-707. PubMed ID: 16893954
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Prediction of protein-protein interaction sites using support vector machines.
    Koike A; Takagi T
    Protein Eng Des Sel; 2004 Feb; 17(2):165-73. PubMed ID: 15047913
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Improving protein-protein interaction prediction using evolutionary information from low-quality MSAs.
    Várnai C; Burkoff NS; Wild DL
    PLoS One; 2017; 12(2):e0169356. PubMed ID: 28166227
    [TBL] [Abstract][Full Text] [Related]  

  • 14. ProMate: a structure based prediction program to identify the location of protein-protein binding sites.
    Neuvirth H; Raz R; Schreiber G
    J Mol Biol; 2004 Apr; 338(1):181-99. PubMed ID: 15050833
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Individually double minimum-distance definition of protein-RNA binding residues and application to structure-based prediction.
    Hu W; Qin L; Li M; Pu X; Guo Y
    J Comput Aided Mol Des; 2018 Dec; 32(12):1363-1373. PubMed ID: 30478757
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Sequence based residue depth prediction using evolutionary information and predicted secondary structure.
    Zhang H; Zhang T; Chen K; Shen S; Ruan J; Kurgan L
    BMC Bioinformatics; 2008 Sep; 9():388. PubMed ID: 18803867
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Analysis and prediction of RNA-binding residues using sequence, evolutionary conservation, and predicted secondary structure and solvent accessibility.
    Zhang T; Zhang H; Chen K; Ruan J; Shen S; Kurgan L
    Curr Protein Pept Sci; 2010 Nov; 11(7):609-28. PubMed ID: 20887256
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Predicting Alpha Helical Transmembrane Proteins Using HMMs.
    Tsaousis GN; Theodoropoulou MC; Hamodrakas SJ; Bagos PG
    Methods Mol Biol; 2017; 1552():63-82. PubMed ID: 28224491
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A hidden Markov model for predicting protein interfaces.
    Nguyen C; Gardiner KJ; Cios KJ
    J Bioinform Comput Biol; 2007 Jun; 5(3):739-53. PubMed ID: 17688314
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Predicting the helix-helix interactions from correlated residue mutations.
    Xiong D; Mao W; Gong H
    Proteins; 2017 Dec; 85(12):2162-2169. PubMed ID: 28833538
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 6.