These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

173 related articles for article (PubMed ID: 30841853)

  • 21. SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome Analysis.
    Johnson BK; Scholz MB; Teal TK; Abramovitch RB
    BMC Bioinformatics; 2016 Feb; 17():66. PubMed ID: 26847232
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Microarray Я US: a user-friendly graphical interface to Bioconductor tools that enables accurate microarray data analysis and expedites comprehensive functional analysis of microarray results.
    Dai Y; Guo L; Li M; Chen YB
    BMC Res Notes; 2012 Jun; 5():282. PubMed ID: 22681702
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Enhanced single-cell RNA-seq workflow reveals coronary artery disease cellular cross-talk and candidate drug targets.
    Ma WF; Hodonsky CJ; Turner AW; Wong D; Song Y; Mosquera JV; Ligay AV; Slenders L; Gancayco C; Pan H; Barrientos NB; Mai D; Alencar GF; Owsiany K; Owens GK; Reilly MP; Li M; Pasterkamp G; Mokry M; van der Laan SW; Khomtchouk BB; Miller CL
    Atherosclerosis; 2022 Jan; 340():12-22. PubMed ID: 34871816
    [TBL] [Abstract][Full Text] [Related]  

  • 24. BART: bioinformatics array research tool.
    Amaral ML; Erikson GA; Shokhirev MN
    BMC Bioinformatics; 2018 Aug; 19(1):296. PubMed ID: 30089462
    [TBL] [Abstract][Full Text] [Related]  

  • 25. Workflows for microarray data processing in the Kepler environment.
    Stropp T; McPhillips T; Ludäscher B; Bieda M
    BMC Bioinformatics; 2012 May; 13():102. PubMed ID: 22594911
    [TBL] [Abstract][Full Text] [Related]  

  • 26. eUTOPIA: solUTion for Omics data PreprocessIng and Analysis.
    Marwah VS; Scala G; Kinaret PAS; Serra A; Alenius H; Fortino V; Greco D
    Source Code Biol Med; 2019; 14():1. PubMed ID: 30728855
    [TBL] [Abstract][Full Text] [Related]  

  • 27. OneStopRNAseq: A Web Application for Comprehensive and Efficient Analyses of RNA-Seq Data.
    Li R; Hu K; Liu H; Green MR; Zhu LJ
    Genes (Basel); 2020 Oct; 11(10):. PubMed ID: 33023248
    [TBL] [Abstract][Full Text] [Related]  

  • 28. GREIN: An Interactive Web Platform for Re-analyzing GEO RNA-seq Data.
    Mahi NA; Najafabadi MF; Pilarczyk M; Kouril M; Medvedovic M
    Sci Rep; 2019 May; 9(1):7580. PubMed ID: 31110304
    [TBL] [Abstract][Full Text] [Related]  

  • 29. scViewer: An Interactive Single-Cell Gene Expression Visualization Tool.
    Patil AR; Kumar G; Zhou H; Warren L
    Cells; 2023 May; 12(11):. PubMed ID: 37296611
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Granatum: a graphical single-cell RNA-Seq analysis pipeline for genomics scientists.
    Zhu X; Wolfgruber TK; Tasato A; Arisdakessian C; Garmire DG; Garmire LX
    Genome Med; 2017 Dec; 9(1):108. PubMed ID: 29202807
    [TBL] [Abstract][Full Text] [Related]  

  • 31. aTAP: automated transcriptome analysis platform for processing RNA-seq data by
    Surachat K; Taylor TD; Wattanamatiphot W; Sukpisit S; Jeenkeawpiam K
    Heliyon; 2022 Aug; 8(8):e10255. PubMed ID: 36033257
    [TBL] [Abstract][Full Text] [Related]  

  • 32. iMir: an integrated pipeline for high-throughput analysis of small non-coding RNA data obtained by smallRNA-Seq.
    Giurato G; De Filippo MR; Rinaldi A; Hashim A; Nassa G; Ravo M; Rizzo F; Tarallo R; Weisz A
    BMC Bioinformatics; 2013 Dec; 14():362. PubMed ID: 24330401
    [TBL] [Abstract][Full Text] [Related]  

  • 33. 3D RNA-seq: a powerful and flexible tool for rapid and accurate differential expression and alternative splicing analysis of RNA-seq data for biologists.
    Guo W; Tzioutziou NA; Stephen G; Milne I; Calixto CP; Waugh R; Brown JWS; Zhang R
    RNA Biol; 2021 Nov; 18(11):1574-1587. PubMed ID: 33345702
    [TBL] [Abstract][Full Text] [Related]  

  • 34. UTAP: User-friendly Transcriptome Analysis Pipeline.
    Kohen R; Barlev J; Hornung G; Stelzer G; Feldmesser E; Kogan K; Safran M; Leshkowitz D
    BMC Bioinformatics; 2019 Mar; 20(1):154. PubMed ID: 30909881
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Integration of RNA-Seq data with heterogeneous microarray data for breast cancer profiling.
    Castillo D; Gálvez JM; Herrera LJ; Román BS; Rojas F; Rojas I
    BMC Bioinformatics; 2017 Nov; 18(1):506. PubMed ID: 29157215
    [TBL] [Abstract][Full Text] [Related]  

  • 36. VIPER: Visualization Pipeline for RNA-seq, a Snakemake workflow for efficient and complete RNA-seq analysis.
    Cornwell M; Vangala M; Taing L; Herbert Z; Köster J; Li B; Sun H; Li T; Zhang J; Qiu X; Pun M; Jeselsohn R; Brown M; Liu XS; Long HW
    BMC Bioinformatics; 2018 Apr; 19(1):135. PubMed ID: 29649993
    [TBL] [Abstract][Full Text] [Related]  

  • 37. ideal: an R/Bioconductor package for interactive differential expression analysis.
    Marini F; Linke J; Binder H
    BMC Bioinformatics; 2020 Dec; 21(1):565. PubMed ID: 33297942
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Goober: a fully integrated and user-friendly microarray data management and analysis solution for core labs and bench biologists.
    Luo W; Gudipati M; Jung K; Chen M; Marschke KB
    J Integr Bioinform; 2009 Aug; 6(1):108. PubMed ID: 20134074
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Interactive analysis of single-cell data using flexible workflows with SCTK2.
    Wang Y; Sarfraz I; Pervaiz N; Hong R; Koga Y; Akavoor V; Cao X; Alabdullatif S; Zaib SA; Wang Z; Jansen F; Yajima M; Johnson WE; Campbell JD
    Patterns (N Y); 2023 Aug; 4(8):100814. PubMed ID: 37602214
    [TBL] [Abstract][Full Text] [Related]  

  • 40. SPEAQeasy: a scalable pipeline for expression analysis and quantification for R/bioconductor-powered RNA-seq analyses.
    Eagles NJ; Burke EE; Leonard J; Barry BK; Stolz JM; Huuki L; Phan BN; Serrato VL; Gutiérrez-Millán E; Aguilar-Ordoñez I; Jaffe AE; Collado-Torres L
    BMC Bioinformatics; 2021 May; 22(1):224. PubMed ID: 33932985
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 9.