These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

249 related articles for article (PubMed ID: 30894839)

  • 1. Validation of a Bioinformatics Workflow for Routine Analysis of Whole-Genome Sequencing Data and Related Challenges for Pathogen Typing in a European National Reference Center:
    Bogaerts B; Winand R; Fu Q; Van Braekel J; Ceyssens PJ; Mattheus W; Bertrand S; De Keersmaecker SCJ; Roosens NHC; Vanneste K
    Front Microbiol; 2019; 10():362. PubMed ID: 30894839
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Validation strategy of a bioinformatics whole genome sequencing workflow for Shiga toxin-producing
    Bogaerts B; Nouws S; Verhaegen B; Denayer S; Van Braekel J; Winand R; Fu Q; Crombé F; Piérard D; Marchal K; Roosens NHC; De Keersmaecker SCJ; Vanneste K
    Microb Genom; 2021 Mar; 7(3):. PubMed ID: 33656437
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A Bioinformatics Whole-Genome Sequencing Workflow for Clinical Mycobacterium tuberculosis Complex Isolate Analysis, Validated Using a Reference Collection Extensively Characterized with Conventional Methods and
    Bogaerts B; Delcourt T; Soetaert K; Boarbi S; Ceyssens PJ; Winand R; Van Braekel J; De Keersmaecker SCJ; Roosens NHC; Marchal K; Mathys V; Vanneste K
    J Clin Microbiol; 2021 May; 59(6):. PubMed ID: 33789960
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Validation and Implementation of Clinical Laboratory Improvements Act-Compliant Whole-Genome Sequencing in the Public Health Microbiology Laboratory.
    Kozyreva VK; Truong CL; Greninger AL; Crandall J; Mukhopadhyay R; Chaturvedi V
    J Clin Microbiol; 2017 Aug; 55(8):2502-2520. PubMed ID: 28592550
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Survey on the Use of Whole-Genome Sequencing for Infectious Diseases Surveillance: Rapid Expansion of European National Capacities, 2015-2016.
    Revez J; Espinosa L; Albiger B; Leitmeyer KC; Struelens MJ;
    Front Public Health; 2017; 5():347. PubMed ID: 29326921
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Analytical Performance Validation of Next-Generation Sequencing Based Clinical Microbiology Assays Using a K-mer Analysis Workflow.
    Lepuschitz S; Weinmaier T; Mrazek K; Beisken S; Weinberger J; Posch AE
    Front Microbiol; 2020; 11():1883. PubMed ID: 32849463
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Validation of Whole-Genome Sequencing for Identification and Characterization of Shiga Toxin-Producing Escherichia coli To Produce Standardized Data To Enable Data Sharing.
    Holmes A; Dallman TJ; Shabaan S; Hanson M; Allison L
    J Clin Microbiol; 2018 Mar; 56(3):. PubMed ID: 29263202
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A Practical Bioinformatics Workflow for Routine Analysis of Bacterial WGS Data.
    Atxaerandio-Landa A; Arrieta-Gisasola A; Laorden L; Bikandi J; Garaizar J; Martinez-Malaxetxebarria I; Martinez-Ballesteros I
    Microorganisms; 2022 Nov; 10(12):. PubMed ID: 36557617
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Whole genome sequencing of Streptococcus pneumoniae: development, evaluation and verification of targets for serogroup and serotype prediction using an automated pipeline.
    Kapatai G; Sheppard CL; Al-Shahib A; Litt DJ; Underwood AP; Harrison TG; Fry NK
    PeerJ; 2016; 4():e2477. PubMed ID: 27672516
    [TBL] [Abstract][Full Text] [Related]  

  • 10.
    Wu Y; Lau HK; Lee T; Lau DK; Payne J
    Appl Environ Microbiol; 2019 Apr; 85(7):. PubMed ID: 30709819
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Detailed Evaluation of Data Analysis Tools for Subtyping of Bacterial Isolates Based on Whole Genome Sequencing:
    Saltykova A; Mattheus W; Bertrand S; Roosens NHC; Marchal K; De Keersmaecker SCJ
    Front Microbiol; 2019; 10():2897. PubMed ID: 31921072
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Surveillance of invasive meningococcal disease based on whole genome sequencing (WGS), Czech Republic, 2015.
    Křížová P; Honskus M; Okonji Z; Musílek M; Kozáková J
    Epidemiol Mikrobiol Imunol; 2018; 67(2):64-73. PubMed ID: 30126283
    [TBL] [Abstract][Full Text] [Related]  

  • 13. GalaxyTrakr: a distributed analysis tool for public health whole genome sequence data accessible to non-bioinformaticians.
    Gangiredla J; Rand H; Benisatto D; Payne J; Strittmatter C; Sanders J; Wolfgang WJ; Libuit K; Herrick JB; Prarat M; Toro M; Farrell T; Strain E
    BMC Genomics; 2021 Feb; 22(1):114. PubMed ID: 33568057
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Web-Based Genome Analysis of Bacterial Meningitis Pathogens for Public Health Applications Using the Bacterial Meningitis Genomic Analysis Platform (BMGAP).
    Buono SA; Kelly RJ; Topaz N; Retchless AC; Silva H; Chen A; Ramos E; Doho G; Khan AN; Okomo-Adhiambo MA; Hu F; Marasini D; Wang X
    Front Genet; 2020; 11():601870. PubMed ID: 33324449
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Evaluation of whole-genome sequencing for outbreak detection of Verotoxigenic Escherichia coli O157:H7 from the Canadian perspective.
    Rumore J; Tschetter L; Kearney A; Kandar R; McCormick R; Walker M; Peterson CL; Reimer A; Nadon C
    BMC Genomics; 2018 Dec; 19(1):870. PubMed ID: 30514209
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Practical issues in implementing whole-genome-sequencing in routine diagnostic microbiology.
    Rossen JWA; Friedrich AW; Moran-Gilad J;
    Clin Microbiol Infect; 2018 Apr; 24(4):355-360. PubMed ID: 29117578
    [TBL] [Abstract][Full Text] [Related]  

  • 17. A Validation Approach of an End-to-End Whole Genome Sequencing Workflow for Source Tracking of
    Portmann AC; Fournier C; Gimonet J; Ngom-Bru C; Barretto C; Baert L
    Front Microbiol; 2018; 9():446. PubMed ID: 29593690
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Systematic Evaluation of Whole Genome Sequence-Based Predictions of
    Cooper AL; Low AJ; Koziol AG; Thomas MC; Leclair D; Tamber S; Wong A; Blais BW; Carrillo CD
    Front Microbiol; 2020; 11():549. PubMed ID: 32318038
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Best approaches to drug-resistance surveillance at the country level.
    Cabibbe AM; Cirillo DM
    Int J Mycobacteriol; 2016 Dec; 5 Suppl 1():S40-S41. PubMed ID: 28043601
    [TBL] [Abstract][Full Text] [Related]  

  • 20. [The possibilities for the implementation of whole genome sequencing (WGS) of Neisseria meningitidis in molecular surveillance of invasive meningococcal disease in the Czech Republic].
    Vacková Z; Křížová P; Jandová Z; Musílek M; Kozáková J
    Epidemiol Mikrobiol Imunol; 2017; 66(1):50-52. PubMed ID: 28374598
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.