1175 related articles for article (PubMed ID: 30911168)
1. Transcriptome-scale super-resolved imaging in tissues by RNA seqFISH.
Eng CL; Lawson M; Zhu Q; Dries R; Koulena N; Takei Y; Yun J; Cronin C; Karp C; Yuan GC; Cai L
Nature; 2019 Apr; 568(7751):235-239. PubMed ID: 30911168
[TBL] [Abstract][Full Text] [Related]
2. Dynamics and Spatial Genomics of the Nascent Transcriptome by Intron seqFISH.
Shah S; Takei Y; Zhou W; Lubeck E; Yun J; Eng CL; Koulena N; Cronin C; Karp C; Liaw EJ; Amin M; Cai L
Cell; 2018 Jul; 174(2):363-376.e16. PubMed ID: 29887381
[TBL] [Abstract][Full Text] [Related]
3. Integration of spatial and single-cell transcriptomic data elucidates mouse organogenesis.
Lohoff T; Ghazanfar S; Missarova A; Koulena N; Pierson N; Griffiths JA; Bardot ES; Eng CL; Tyser RCV; Argelaguet R; Guibentif C; Srinivas S; Briscoe J; Simons BD; Hadjantonakis AK; Göttgens B; Reik W; Nichols J; Cai L; Marioni JC
Nat Biotechnol; 2022 Jan; 40(1):74-85. PubMed ID: 34489600
[TBL] [Abstract][Full Text] [Related]
4. Spatial transcriptome profiling by MERFISH reveals subcellular RNA compartmentalization and cell cycle-dependent gene expression.
Xia C; Fan J; Emanuel G; Hao J; Zhuang X
Proc Natl Acad Sci U S A; 2019 Sep; 116(39):19490-19499. PubMed ID: 31501331
[TBL] [Abstract][Full Text] [Related]
5. Dense transcript profiling in single cells by image correlation decoding.
Coskun AF; Cai L
Nat Methods; 2016 Aug; 13(8):657-60. PubMed ID: 27271198
[TBL] [Abstract][Full Text] [Related]
6. RNA imaging. Spatially resolved, highly multiplexed RNA profiling in single cells.
Chen KH; Boettiger AN; Moffitt JR; Wang S; Zhuang X
Science; 2015 Apr; 348(6233):aaa6090. PubMed ID: 25858977
[TBL] [Abstract][Full Text] [Related]
7. In Situ Transcription Profiling of Single Cells Reveals Spatial Organization of Cells in the Mouse Hippocampus.
Shah S; Lubeck E; Zhou W; Cai L
Neuron; 2016 Oct; 92(2):342-357. PubMed ID: 27764670
[TBL] [Abstract][Full Text] [Related]
8. Imaging and Quantification of mRNA Molecules at Single-Cell Resolution in the Human Fungal Pathogen Candida albicans.
Moreno-Velásquez SD; Pérez JC
mSphere; 2021 Aug; 6(4):e0041121. PubMed ID: 34232078
[TBL] [Abstract][Full Text] [Related]
9. MERFISHing for spatial context.
Shalek AK; Satija R
Trends Immunol; 2015 Jul; 36(7):390-1. PubMed ID: 26013647
[TBL] [Abstract][Full Text] [Related]
10. Highly multiplexed transcriptome imaging.
Strack R
Nat Methods; 2015 Jun; 12(6):486-7. PubMed ID: 26221655
[No Abstract] [Full Text] [Related]
11. Accurate single-molecule spot detection for image-based spatial transcriptomics with weakly supervised deep learning.
Laubscher E; Wang X; Razin N; Dougherty T; Xu RJ; Ombelets L; Pao E; Graf W; Moffitt JR; Yue Y; Van Valen D
Cell Syst; 2024 May; 15(5):475-482.e6. PubMed ID: 38754367
[TBL] [Abstract][Full Text] [Related]
12. RNA: Putting transcriptomics in its place.
Burgess DJ
Nat Rev Genet; 2015 Jun; 16(6):319. PubMed ID: 25948245
[No Abstract] [Full Text] [Related]
13. Hybridization-based in situ sequencing (HybISS) for spatially resolved transcriptomics in human and mouse brain tissue.
Gyllborg D; Langseth CM; Qian X; Choi E; Salas SM; Hilscher MM; Lein ES; Nilsson M
Nucleic Acids Res; 2020 Nov; 48(19):e112. PubMed ID: 32990747
[TBL] [Abstract][Full Text] [Related]
14. Molecularly defined and spatially resolved cell atlas of the whole mouse brain.
Zhang M; Pan X; Jung W; Halpern AR; Eichhorn SW; Lei Z; Cohen L; Smith KA; Tasic B; Yao Z; Zeng H; Zhuang X
Nature; 2023 Dec; 624(7991):343-354. PubMed ID: 38092912
[TBL] [Abstract][Full Text] [Related]
15. Spatial reconstruction of single-cell gene expression data.
Satija R; Farrell JA; Gennert D; Schier AF; Regev A
Nat Biotechnol; 2015 May; 33(5):495-502. PubMed ID: 25867923
[TBL] [Abstract][Full Text] [Related]
16. Cell segmentation-free inference of cell types from in situ transcriptomics data.
Park J; Choi W; Tiesmeyer S; Long B; Borm LE; Garren E; Nguyen TN; Tasic B; Codeluppi S; Graf T; Schlesner M; Stegle O; Eils R; Ishaque N
Nat Commun; 2021 Jun; 12(1):3545. PubMed ID: 34112806
[TBL] [Abstract][Full Text] [Related]
17. Scalable in situ single-cell profiling by electrophoretic capture of mRNA using EEL FISH.
Borm LE; Mossi Albiach A; Mannens CCA; Janusauskas J; Özgün C; Fernández-García D; Hodge R; Castillo F; Hedin CRH; Villablanca EJ; Uhlén P; Lein ES; Codeluppi S; Linnarsson S
Nat Biotechnol; 2023 Feb; 41(2):222-231. PubMed ID: 36138169
[TBL] [Abstract][Full Text] [Related]
18. An anatomically comprehensive atlas of the adult human brain transcriptome.
Hawrylycz MJ; Lein ES; Guillozet-Bongaarts AL; Shen EH; Ng L; Miller JA; van de Lagemaat LN; Smith KA; Ebbert A; Riley ZL; Abajian C; Beckmann CF; Bernard A; Bertagnolli D; Boe AF; Cartagena PM; Chakravarty MM; Chapin M; Chong J; Dalley RA; David Daly B; Dang C; Datta S; Dee N; Dolbeare TA; Faber V; Feng D; Fowler DR; Goldy J; Gregor BW; Haradon Z; Haynor DR; Hohmann JG; Horvath S; Howard RE; Jeromin A; Jochim JM; Kinnunen M; Lau C; Lazarz ET; Lee C; Lemon TA; Li L; Li Y; Morris JA; Overly CC; Parker PD; Parry SE; Reding M; Royall JJ; Schulkin J; Sequeira PA; Slaughterbeck CR; Smith SC; Sodt AJ; Sunkin SM; Swanson BE; Vawter MP; Williams D; Wohnoutka P; Zielke HR; Geschwind DH; Hof PR; Smith SM; Koch C; Grant SGN; Jones AR
Nature; 2012 Sep; 489(7416):391-399. PubMed ID: 22996553
[TBL] [Abstract][Full Text] [Related]
19. Profiling the transcriptome with RNA SPOTs.
Eng CL; Shah S; Thomassie J; Cai L
Nat Methods; 2017 Dec; 14(12):1153-1155. PubMed ID: 29131163
[TBL] [Abstract][Full Text] [Related]
20. Rare Cell Detection by Single-Cell RNA Sequencing as Guided by Single-Molecule RNA FISH.
Torre E; Dueck H; Shaffer S; Gospocic J; Gupte R; Bonasio R; Kim J; Murray J; Raj A
Cell Syst; 2018 Feb; 6(2):171-179.e5. PubMed ID: 29454938
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]