These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

253 related articles for article (PubMed ID: 30923827)

  • 1. TriPepSVM: de novo prediction of RNA-binding proteins based on short amino acid motifs.
    Bressin A; Schulte-Sasse R; Figini D; Urdaneta EC; Beckmann BM; Marsico A
    Nucleic Acids Res; 2019 May; 47(9):4406-4417. PubMed ID: 30923827
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Dissecting the expression relationships between RNA-binding proteins and their cognate targets in eukaryotic post-transcriptional regulatory networks.
    Nishtala S; Neelamraju Y; Janga SC
    Sci Rep; 2016 May; 6():25711. PubMed ID: 27161996
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Finding RNA structure in the unstructured RBPome.
    Orenstein Y; Ohler U; Berger B
    BMC Genomics; 2018 Feb; 19(1):154. PubMed ID: 29463232
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Ribonucleoprotein particles: advances and challenges in computational methods.
    Dvir S; Argoetti A; Mandel-Gutfreund Y
    Curr Opin Struct Biol; 2018 Dec; 53():124-130. PubMed ID: 30172766
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Partner-specific prediction of RNA-binding residues in proteins: A critical assessment.
    Jung Y; El-Manzalawy Y; Dobbs D; Honavar VG
    Proteins; 2019 Mar; 87(3):198-211. PubMed ID: 30536635
    [TBL] [Abstract][Full Text] [Related]  

  • 6. A combined sequence and structure based method for discovering enriched motifs in RNA from in vivo binding data.
    Polishchuk M; Paz I; Kohen R; Mesika R; Yakhini Z; Mandel-Gutfreund Y
    Methods; 2017 Apr; 118-119():73-81. PubMed ID: 28274760
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Prediction of RNA-protein sequence and structure binding preferences using deep convolutional and recurrent neural networks.
    Pan X; Rijnbeek P; Yan J; Shen HB
    BMC Genomics; 2018 Jul; 19(1):511. PubMed ID: 29970003
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Comprehensive Identification of RNA-Binding Domains in Human Cells.
    Castello A; Fischer B; Frese CK; Horos R; Alleaume AM; Foehr S; Curk T; Krijgsveld J; Hentze MW
    Mol Cell; 2016 Aug; 63(4):696-710. PubMed ID: 27453046
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Sequence-Based Prediction of RNA-Binding Residues in Proteins.
    Walia RR; El-Manzalawy Y; Honavar VG; Dobbs D
    Methods Mol Biol; 2017; 1484():205-235. PubMed ID: 27787829
    [TBL] [Abstract][Full Text] [Related]  

  • 10. AIRBP: Accurate identification of RNA-binding proteins using machine learning techniques.
    Mishra A; Khanal R; Kabir WU; Hoque T
    Artif Intell Med; 2021 Mar; 113():102034. PubMed ID: 33685590
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A deep learning framework for modeling structural features of RNA-binding protein targets.
    Zhang S; Zhou J; Hu H; Gong H; Chen L; Cheng C; Zeng J
    Nucleic Acids Res; 2016 Feb; 44(4):e32. PubMed ID: 26467480
    [TBL] [Abstract][Full Text] [Related]  

  • 12. RNA-protein binding motifs mining with a new hybrid deep learning based cross-domain knowledge integration approach.
    Pan X; Shen HB
    BMC Bioinformatics; 2017 Feb; 18(1):136. PubMed ID: 28245811
    [TBL] [Abstract][Full Text] [Related]  

  • 13. SONAR Discovers RNA-Binding Proteins from Analysis of Large-Scale Protein-Protein Interactomes.
    Brannan KW; Jin W; Huelga SC; Banks CA; Gilmore JM; Florens L; Washburn MP; Van Nostrand EL; Pratt GA; Schwinn MK; Daniels DL; Yeo GW
    Mol Cell; 2016 Oct; 64(2):282-293. PubMed ID: 27720645
    [TBL] [Abstract][Full Text] [Related]  

  • 14. RNAcontext: a new method for learning the sequence and structure binding preferences of RNA-binding proteins.
    Kazan H; Ray D; Chan ET; Hughes TR; Morris Q
    PLoS Comput Biol; 2010 Jul; 6(7):e1000832. PubMed ID: 20617199
    [TBL] [Abstract][Full Text] [Related]  

  • 15. In Silico Prediction and Validation of Novel RNA Binding Proteins and Residues in the Human Proteome.
    Chowdhury S; Zhang J; Kurgan L
    Proteomics; 2018 Nov; 18(21-22):e1800064. PubMed ID: 29806170
    [TBL] [Abstract][Full Text] [Related]  

  • 16. SVM based prediction of RNA-binding proteins using binding residues and evolutionary information.
    Kumar M; Gromiha MM; Raghava GP
    J Mol Recognit; 2011; 24(2):303-13. PubMed ID: 20677174
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Emerging Roles of Disordered Sequences in RNA-Binding Proteins.
    Calabretta S; Richard S
    Trends Biochem Sci; 2015 Nov; 40(11):662-672. PubMed ID: 26481498
    [TBL] [Abstract][Full Text] [Related]  

  • 18. EuRBPDB: a comprehensive resource for annotation, functional and oncological investigation of eukaryotic RNA binding proteins (RBPs).
    Liao JY; Yang B; Zhang YC; Wang XJ; Ye Y; Peng JW; Yang ZZ; He JH; Zhang Y; Hu K; Lin DC; Yin D
    Nucleic Acids Res; 2020 Jan; 48(D1):D307-D313. PubMed ID: 31598693
    [TBL] [Abstract][Full Text] [Related]  

  • 19. CAPRI enables comparison of evolutionarily conserved RNA interacting regions.
    Panhale A; Richter FM; Ramírez F; Shvedunova M; Manke T; Mittler G; Akhtar A
    Nat Commun; 2019 Jun; 10(1):2682. PubMed ID: 31213602
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Refining the pool of RNA-binding domains advances the classification and prediction of RNA-binding proteins.
    Wassmer E; Koppány G; Hermes M; Diederichs S; Caudron-Herger M
    Nucleic Acids Res; 2024 Jul; 52(13):7504-7522. PubMed ID: 38917322
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 13.