176 related articles for article (PubMed ID: 30958473)
1. ATAC-seq Assay with Low Mitochondrial DNA Contamination from Primary Human CD4+ T Lymphocytes.
Rickner HD; Niu SY; Cheng CS
J Vis Exp; 2019 Mar; (145):. PubMed ID: 30958473
[TBL] [Abstract][Full Text] [Related]
2. Assay for Transposase-Accessible Chromatin Using Sequencing (ATAC-seq) Data Analysis.
Miskimen KLS; Chan ER; Haines JL
Curr Protoc Hum Genet; 2017 Jan; 92():20.4.1-20.4.13. PubMed ID: 28075484
[TBL] [Abstract][Full Text] [Related]
3. Analytical Approaches for ATAC-seq Data Analysis.
Smith JP; Sheffield NC
Curr Protoc Hum Genet; 2020 Jun; 106(1):e101. PubMed ID: 32543102
[TBL] [Abstract][Full Text] [Related]
4. Mapping Genome-wide Accessible Chromatin in Primary Human T Lymphocytes by ATAC-Seq.
Grbesa I; Tannenbaum M; Sarusi-Portuguez A; Schwartz M; Hakim O
J Vis Exp; 2017 Nov; (129):. PubMed ID: 29155775
[TBL] [Abstract][Full Text] [Related]
5. Chromatin accessibility profiling by ATAC-seq.
Grandi FC; Modi H; Kampman L; Corces MR
Nat Protoc; 2022 Jun; 17(6):1518-1552. PubMed ID: 35478247
[TBL] [Abstract][Full Text] [Related]
6. Optimized assay for transposase-accessible chromatin by sequencing (ATAC-seq) library preparation from adult Drosophila melanogaster neurons.
Merrill CB; Pabon MA; Montgomery AB; Rodan AR; Rothenfluh A
Sci Rep; 2022 Apr; 12(1):6043. PubMed ID: 35411004
[TBL] [Abstract][Full Text] [Related]
7. Identification of Open Chromatin Regions in Plant Genomes Using ATAC-Seq.
Bajic M; Maher KA; Deal RB
Methods Mol Biol; 2018; 1675():183-201. PubMed ID: 29052193
[TBL] [Abstract][Full Text] [Related]
8. ATAC-Seq Analysis of Accessible Chromatin: From Experimental Steps to Data Analysis.
Tatara M; Ikeda T; Namekawa SH; Maezawa S
Methods Mol Biol; 2023; 2577():65-81. PubMed ID: 36173566
[TBL] [Abstract][Full Text] [Related]
9. Adipocyte-Specific ATAC-Seq with Adipose Tissues Using Fluorescence-Activated Nucleus Sorting.
Kim K; Taleb S; So J; Wann J; Cheol Roh H
J Vis Exp; 2023 Mar; (193):. PubMed ID: 37010301
[TBL] [Abstract][Full Text] [Related]
10. Measuring Chromatin Accessibility: ATAC-Seq.
Sahu SK; Basu A; Tiwari VK
Methods Mol Biol; 2021; 2351():105-121. PubMed ID: 34382186
[TBL] [Abstract][Full Text] [Related]
11. Detect accessible chromatin using ATAC-sequencing, from principle to applications.
Sun Y; Miao N; Sun T
Hereditas; 2019; 156():29. PubMed ID: 31427911
[TBL] [Abstract][Full Text] [Related]
12. Reducing mitochondrial reads in ATAC-seq using CRISPR/Cas9.
Montefiori L; Hernandez L; Zhang Z; Gilad Y; Ober C; Crawford G; Nobrega M; Jo Sakabe N
Sci Rep; 2017 May; 7(1):2451. PubMed ID: 28550296
[TBL] [Abstract][Full Text] [Related]
13. ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide.
Buenrostro JD; Wu B; Chang HY; Greenleaf WJ
Curr Protoc Mol Biol; 2015 Jan; 109():21.29.1-21.29.9. PubMed ID: 25559105
[TBL] [Abstract][Full Text] [Related]
14. ATACseqQC: a Bioconductor package for post-alignment quality assessment of ATAC-seq data.
Ou J; Liu H; Yu J; Kelliher MA; Castilla LH; Lawson ND; Zhu LJ
BMC Genomics; 2018 Mar; 19(1):169. PubMed ID: 29490630
[TBL] [Abstract][Full Text] [Related]
15. ATAC-seq Optimization for Cancer Epigenetics Research.
Cooper M; Ray A; Bhattacharya A; Dhasarathy A; Takaku M
J Vis Exp; 2022 Jun; (184):. PubMed ID: 35848835
[TBL] [Abstract][Full Text] [Related]
16. AIAP: A Quality Control and Integrative Analysis Package to Improve ATAC-seq Data Analysis.
Liu S; Li D; Lyu C; Gontarz PM; Miao B; Madden PAF; Wang T; Zhang B
Genomics Proteomics Bioinformatics; 2021 Aug; 19(4):641-651. PubMed ID: 34273560
[TBL] [Abstract][Full Text] [Related]
17. Transcript-indexed ATAC-seq for precision immune profiling.
Satpathy AT; Saligrama N; Buenrostro JD; Wei Y; Wu B; Rubin AJ; Granja JM; Lareau CA; Li R; Qi Y; Parker KR; Mumbach MR; Serratelli WS; Gennert DG; Schep AN; Corces MR; Khodadoust MS; Kim YH; Khavari PA; Greenleaf WJ; Davis MM; Chang HY
Nat Med; 2018 May; 24(5):580-590. PubMed ID: 29686426
[TBL] [Abstract][Full Text] [Related]
18. Epigenetic Application of ATAC-Seq Based on Tn5 Transposase Purification Technology.
Li W; Tim Wu U; Cheng Y; Huang Y; Mao L; Sun M; Qiu C; Zhou L; Gao L
Genet Res (Camb); 2022; 2022():8429207. PubMed ID: 36062065
[TBL] [Abstract][Full Text] [Related]
19. Assay for Transposase-Accessible Chromatin Using Sequencing of Freshly Isolated Muscle Stem Cells.
Yekelchyk M; Guenther S; Braun T
Methods Mol Biol; 2023; 2640():397-412. PubMed ID: 36995609
[TBL] [Abstract][Full Text] [Related]
20. [Advances in assay for transposase-accessible chromatin with high-throughput sequencing].
Wu J; Quan JP; Ye Y; Wu ZF; Yang J; Yang M; Zheng EQ
Yi Chuan; 2020 Apr; 42(4):333-346. PubMed ID: 32312702
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]