BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

167 related articles for article (PubMed ID: 31053575)

  • 1. Absolute quantification of translational regulation and burden using combined sequencing approaches.
    Gorochowski TE; Chelysheva I; Eriksen M; Nair P; Pedersen S; Ignatova Z
    Mol Syst Biol; 2019 May; 15(5):e8719. PubMed ID: 31053575
    [TBL] [Abstract][Full Text] [Related]  

  • 2. From reporters to endogenous genes: the impact of the first five codons on translation efficiency in
    Moreira MH; Barros GC; Requião RD; Rossetto S; Domitrovic T; Palhano FL
    RNA Biol; 2019 Dec; 16(12):1806-1816. PubMed ID: 31470761
    [TBL] [Abstract][Full Text] [Related]  

  • 3. ORFeus: a computational method to detect programmed ribosomal frameshifts and other non-canonical translation events.
    Richardson MO; Eddy SR
    BMC Bioinformatics; 2023 Dec; 24(1):471. PubMed ID: 38093195
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Scikit-ribo Enables Accurate Estimation and Robust Modeling of Translation Dynamics at Codon Resolution.
    Fang H; Huang YF; Radhakrishnan A; Siepel A; Lyon GJ; Schatz MC
    Cell Syst; 2018 Feb; 6(2):180-191.e4. PubMed ID: 29361467
    [TBL] [Abstract][Full Text] [Related]  

  • 5. A systematically-revised ribosome profiling method for bacteria reveals pauses at single-codon resolution.
    Mohammad F; Green R; Buskirk AR
    Elife; 2019 Feb; 8():. PubMed ID: 30724162
    [TBL] [Abstract][Full Text] [Related]  

  • 6. What, where, and how: Regulation of translation and the translational landscape in plants.
    Wu HL; Jen J; Hsu PY
    Plant Cell; 2024 May; 36(5):1540-1564. PubMed ID: 37437121
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Structured RNA Contaminants in Bacterial Ribo-Seq.
    Fremin BJ; Bhatt AS
    mSphere; 2020 Oct; 5(5):. PubMed ID: 33087519
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Ribosome Profiling Methods Adapted to the Study of RNA-Dependent Translation Regulation in Staphylococcus aureus.
    Kohl MP; Chane-Woon-Ming B; Bahena-Ceron R; Jaramillo-Ponce J; Antoine L; Herrgott L; Romby P; Marzi S
    Methods Mol Biol; 2024; 2741():73-100. PubMed ID: 38217649
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Principles of gene regulation quantitatively connect DNA to RNA and proteins in bacteria.
    Balakrishnan R; Mori M; Segota I; Zhang Z; Aebersold R; Ludwig C; Hwa T
    Science; 2022 Dec; 378(6624):eabk2066. PubMed ID: 36480614
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Evolutionary Convergence of Pathway-Specific Enzyme Expression Stoichiometry.
    Lalanne JB; Taggart JC; Guo MS; Herzel L; Schieler A; Li GW
    Cell; 2018 Apr; 173(3):749-761.e38. PubMed ID: 29606352
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comprehensive translational profiling and STE AI uncover rapid control of protein biosynthesis during cell stress.
    Horvath A; Janapala Y; Woodward K; Mahmud S; Cleynen A; Gardiner EE; Hannan RD; Eyras E; Preiss T; Shirokikh NE
    Nucleic Acids Res; 2024 May; ():. PubMed ID: 38721779
    [TBL] [Abstract][Full Text] [Related]  

  • 12. The IGF2BP3-COPS7B Axis Facilitates mRNA Translation to Drive Colorectal Cancer Progression.
    Tang J; Wang S; Weng M; Guo Q; Ren L; He Y; Cui Z; Cong M; Qin M; Yu J; Su R; Li X
    Cancer Res; 2023 Nov; 83(21):3593-3610. PubMed ID: 37560971
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Ribosome profiling reveals the fine-tuned response of
    Schumacher K; Gelhausen R; Kion-Crosby W; Barquist L; Backofen R; Jung K
    mSystems; 2023 Dec; 8(6):e0103723. PubMed ID: 37909716
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Transcriptome-wide profiling of acute stress induced changes in ribosome occupancy level using external standards.
    Shieh AW; Bansal SK; Zuo Z; Wang SH
    PLoS One; 2023; 18(11):e0294308. PubMed ID: 37988379
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Next-generation analysis of gene expression regulation--comparing the roles of synthesis and degradation.
    McManus J; Cheng Z; Vogel C
    Mol Biosyst; 2015 Oct; 11(10):2680-9. PubMed ID: 26259698
    [TBL] [Abstract][Full Text] [Related]  

  • 16. How synonymous mutations alter enzyme structure and function over long timescales.
    Jiang Y; Neti SS; Sitarik I; Pradhan P; To P; Xia Y; Fried SD; Booker SJ; O'Brien EP
    Nat Chem; 2023 Mar; 15(3):308-318. PubMed ID: 36471044
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Long-read Ribo-STAMP simultaneously measures transcription and translation with isoform resolution.
    Jagannatha P; Tankka AT; Lorenz DA; Yu T; Yee BA; Brannan KW; Zhou CJ; Underwood JG; Yeo GW
    Genome Res; 2024 Jun; ():. PubMed ID: 38906680
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Careful accounting of extrinsic noise in protein expression reveals correlations among its sources.
    Cole JA; Luthey-Schulten Z
    Phys Rev E; 2017 Jun; 95(6-1):062418. PubMed ID: 28709241
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Following Ribosome Footprints to Understand Translation at a Genome Wide Level.
    Eastman G; Smircich P; Sotelo-Silveira JR
    Comput Struct Biotechnol J; 2018; 16():167-176. PubMed ID: 30069283
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Making sense of mRNA translational "noise".
    Mao Y; Qian SB
    Semin Cell Dev Biol; 2024 Feb; 154(Pt B):114-122. PubMed ID: 36925447
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.