These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

511 related articles for article (PubMed ID: 31062021)

  • 21. MUSCLE: multiple sequence alignment with high accuracy and high throughput.
    Edgar RC
    Nucleic Acids Res; 2004; 32(5):1792-7. PubMed ID: 15034147
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Recent developments in the MAFFT multiple sequence alignment program.
    Katoh K; Toh H
    Brief Bioinform; 2008 Jul; 9(4):286-98. PubMed ID: 18372315
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Robust sequence alignment using evolutionary rates coupled with an amino acid substitution matrix.
    Ndhlovu A; Hazelhurst S; Durand PM
    BMC Bioinformatics; 2015 Aug; 16():255. PubMed ID: 26269100
    [TBL] [Abstract][Full Text] [Related]  

  • 24. AQUA: automated quality improvement for multiple sequence alignments.
    Muller J; Creevey CJ; Thompson JD; Arendt D; Bork P
    Bioinformatics; 2010 Jan; 26(2):263-5. PubMed ID: 19926669
    [TBL] [Abstract][Full Text] [Related]  

  • 25. GUIDANCE: a web server for assessing alignment confidence scores.
    Penn O; Privman E; Ashkenazy H; Landan G; Graur D; Pupko T
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W23-8. PubMed ID: 20497997
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Improving model construction of profile HMMs for remote homology detection through structural alignment.
    Bernardes JS; Dávila AM; Costa VS; Zaverucha G
    BMC Bioinformatics; 2007 Nov; 8():435. PubMed ID: 17999748
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Protein multiple sequence alignment benchmarking through secondary structure prediction.
    Le Q; Sievers F; Higgins DG
    Bioinformatics; 2017 May; 33(9):1331-1337. PubMed ID: 28093407
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Assessing the efficiency of multiple sequence alignment programs.
    Pais FS; Ruy PC; Oliveira G; Coimbra RS
    Algorithms Mol Biol; 2014 Mar; 9(1):4. PubMed ID: 24602402
    [TBL] [Abstract][Full Text] [Related]  

  • 29. MSAIndelFR: a scheme for multiple protein sequence alignment using information on indel flanking regions.
    Al-Shatnawi M; Ahmad MO; Swamy MN
    BMC Bioinformatics; 2015 Nov; 16():393. PubMed ID: 26597571
    [TBL] [Abstract][Full Text] [Related]  

  • 30. NdPASA: a pairwise sequence alignment server for distantly related proteins.
    Li W; Wang J; Feng JA
    Bioinformatics; 2005 Oct; 21(19):3803-5. PubMed ID: 16105904
    [TBL] [Abstract][Full Text] [Related]  

  • 31. PISCES: a protein sequence culling server.
    Wang G; Dunbrack RL
    Bioinformatics; 2003 Aug; 19(12):1589-91. PubMed ID: 12912846
    [TBL] [Abstract][Full Text] [Related]  

  • 32. PSI/TM-Coffee: a web server for fast and accurate multiple sequence alignments of regular and transmembrane proteins using homology extension on reduced databases.
    Floden EW; Tommaso PD; Chatzou M; Magis C; Notredame C; Chang JM
    Nucleic Acids Res; 2016 Jul; 44(W1):W339-43. PubMed ID: 27106060
    [TBL] [Abstract][Full Text] [Related]  

  • 33. A knowledge-based multiple-sequence alignment algorithm.
    Nguyen KD; Pan Y
    IEEE/ACM Trans Comput Biol Bioinform; 2013; 10(4):884-96. PubMed ID: 24334383
    [TBL] [Abstract][Full Text] [Related]  

  • 34. PROMALS3D: a tool for multiple protein sequence and structure alignments.
    Pei J; Kim BH; Grishin NV
    Nucleic Acids Res; 2008 Apr; 36(7):2295-300. PubMed ID: 18287115
    [TBL] [Abstract][Full Text] [Related]  

  • 35. PROMALS3D web server for accurate multiple protein sequence and structure alignments.
    Pei J; Tang M; Grishin NV
    Nucleic Acids Res; 2008 Jul; 36(Web Server issue):W30-4. PubMed ID: 18503087
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Structure-dependent sequence alignment for remotely related proteins.
    Yang AS
    Bioinformatics; 2002 Dec; 18(12):1658-65. PubMed ID: 12490451
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Accuracy of structure-based sequence alignment of automatic methods.
    Kim C; Lee B
    BMC Bioinformatics; 2007 Sep; 8():355. PubMed ID: 17883866
    [TBL] [Abstract][Full Text] [Related]  

  • 38. SATCHMO-JS: a webserver for simultaneous protein multiple sequence alignment and phylogenetic tree construction.
    Hagopian R; Davidson JR; Datta RS; Samad B; Jarvis GR; Sjölander K
    Nucleic Acids Res; 2010 Jul; 38(Web Server issue):W29-34. PubMed ID: 20430824
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Multiple alignment of DNA sequences with MAFFT.
    Katoh K; Asimenos G; Toh H
    Methods Mol Biol; 2009; 537():39-64. PubMed ID: 19378139
    [TBL] [Abstract][Full Text] [Related]  

  • 40. The accuracy of several multiple sequence alignment programs for proteins.
    Nuin PA; Wang Z; Tillier ER
    BMC Bioinformatics; 2006 Oct; 7():471. PubMed ID: 17062146
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 26.