389 related articles for article (PubMed ID: 31062304)
1. Modeling Cellular Differentiation and Reprogramming with Gene Regulatory Networks.
Hartmann A; Ravichandran S; Del Sol A
Methods Mol Biol; 2019; 1975():37-51. PubMed ID: 31062304
[TBL] [Abstract][Full Text] [Related]
2. Applying attractor dynamics to infer gene regulatory interactions involved in cellular differentiation.
Ghaffarizadeh A; Podgorski GJ; Flann NS
Biosystems; 2017 May; 155():29-41. PubMed ID: 28254369
[TBL] [Abstract][Full Text] [Related]
3. CABeRNET: a Cytoscape app for augmented Boolean models of gene regulatory NETworks.
Paroni A; Graudenzi A; Caravagna G; Damiani C; Mauri G; Antoniotti M
BMC Bioinformatics; 2016 Feb; 17():64. PubMed ID: 26846964
[TBL] [Abstract][Full Text] [Related]
4. Computational Analysis of Altering Cell Fate.
Abdallah HM; Del Vecchio D
Methods Mol Biol; 2019; 1975():363-405. PubMed ID: 31062319
[TBL] [Abstract][Full Text] [Related]
5. A Generalized Gene-Regulatory Network Model of Stem Cell Differentiation for Predicting Lineage Specifiers.
Okawa S; Nicklas S; Zickenrott S; Schwamborn JC; Del Sol A
Stem Cell Reports; 2016 Sep; 7(3):307-315. PubMed ID: 27546532
[TBL] [Abstract][Full Text] [Related]
6. A Boolean Logical model for Reprogramming of Testes-derived male Germline Stem Cells into Germline pluripotent stem cells.
Guttula PK; Monteiro PT; Gupta MK
Comput Methods Programs Biomed; 2020 Aug; 192():105473. PubMed ID: 32305736
[TBL] [Abstract][Full Text] [Related]
7. Detecting cellular reprogramming determinants by differential stability analysis of gene regulatory networks.
Crespo I; Perumal TM; Jurkowski W; del Sol A
BMC Syst Biol; 2013 Dec; 7():140. PubMed ID: 24350678
[TBL] [Abstract][Full Text] [Related]
8. Biological computational approaches: new hopes to improve (re)programming robustness, regenerative medicine and cancer therapeutics.
Ebrahimi B
Differentiation; 2016; 92(1-2):35-40. PubMed ID: 27056282
[TBL] [Abstract][Full Text] [Related]
9. Relative stability of network states in Boolean network models of gene regulation in development.
Zhou JX; Samal A; d'Hérouël AF; Price ND; Huang S
Biosystems; 2016; 142-143():15-24. PubMed ID: 26965665
[TBL] [Abstract][Full Text] [Related]
10. Molecular Interaction Networks to Select Factors for Cell Conversion.
Ouyang JF; Kamaraj US; Polo JM; Gough J; Rackham OJL
Methods Mol Biol; 2019; 1975():333-361. PubMed ID: 31062318
[TBL] [Abstract][Full Text] [Related]
11. Diversity of temporal correlations between genes in models of noisy and noiseless gene networks.
Ribeiro AS; Lloyd-Price J; Chowdhury S; Yli-Harja O
Biosystems; 2011; 104(2-3):136-44. PubMed ID: 21356270
[TBL] [Abstract][Full Text] [Related]
12. Systems biology of stem cell fate and cellular reprogramming.
Macarthur BD; Ma'ayan A; Lemischka IR
Nat Rev Mol Cell Biol; 2009 Oct; 10(10):672-81. PubMed ID: 19738627
[TBL] [Abstract][Full Text] [Related]
13. A Blueprint for a Synthetic Genetic Feedback Controller to Reprogram Cell Fate.
Del Vecchio D; Abdallah H; Qian Y; Collins JJ
Cell Syst; 2017 Jan; 4(1):109-120.e11. PubMed ID: 28065574
[TBL] [Abstract][Full Text] [Related]
14. Algorithm for cellular reprogramming.
Ronquist S; Patterson G; Muir LA; Lindsly S; Chen H; Brown M; Wicha MS; Bloch A; Brockett R; Rajapakse I
Proc Natl Acad Sci U S A; 2017 Nov; 114(45):11832-11837. PubMed ID: 29078370
[TBL] [Abstract][Full Text] [Related]
15. SAILoR: Structure-Aware Inference of Logic Rules.
Pušnik Ž; Mraz M; Zimic N; Moškon M
PLoS One; 2024; 19(6):e0304102. PubMed ID: 38861487
[TBL] [Abstract][Full Text] [Related]
16. A computational model for understanding stem cell, trophectoderm and endoderm lineage determination.
Chickarmane V; Peterson C
PLoS One; 2008; 3(10):e3478. PubMed ID: 18941526
[TBL] [Abstract][Full Text] [Related]
17. Stochastic Boolean networks: an efficient approach to modeling gene regulatory networks.
Liang J; Han J
BMC Syst Biol; 2012 Aug; 6():113. PubMed ID: 22929591
[TBL] [Abstract][Full Text] [Related]
18. Reprogramming of regulatory network using expression uncovers sex-specific gene regulation in Drosophila.
Wang Y; Cho DY; Lee H; Fear J; Oliver B; Przytycka TM
Nat Commun; 2018 Oct; 9(1):4061. PubMed ID: 30283019
[TBL] [Abstract][Full Text] [Related]
19. Gene Regulatory Networks from Single Cell Data for Exploring Cell Fate Decisions.
Chan TE; Stumpf MPH; Babtie AC
Methods Mol Biol; 2019; 1975():211-238. PubMed ID: 31062312
[TBL] [Abstract][Full Text] [Related]
20. ATLANTIS - Attractor Landscape Analysis Toolbox for Cell Fate Discovery and Reprogramming.
Shah OS; Chaudhary MFA; Awan HA; Fatima F; Arshad Z; Amina B; Ahmed M; Hameed H; Furqan M; Khalid S; Faisal A; Chaudhary SU
Sci Rep; 2018 Feb; 8(1):3554. PubMed ID: 29476134
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
