These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

179 related articles for article (PubMed ID: 31084607)

  • 1. Polymer coil-globule phase transition is a universal folding principle of Drosophila epigenetic domains.
    Lesage A; Dahirel V; Victor JM; Barbi M
    Epigenetics Chromatin; 2019 May; 12(1):28. PubMed ID: 31084607
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Distinct polymer physics principles govern chromatin dynamics in mouse and Drosophila topological domains.
    Ea V; Sexton T; Gostan T; Herviou L; Baudement MO; Zhang Y; Berlivet S; Le Lay-Taha MN; Cathala G; Lesne A; Victor JM; Fan Y; Cavalli G; Forné T
    BMC Genomics; 2015 Aug; 16(1):607. PubMed ID: 26271925
    [TBL] [Abstract][Full Text] [Related]  

  • 3. Super-resolution imaging reveals distinct chromatin folding for different epigenetic states.
    Boettiger AN; Bintu B; Moffitt JR; Wang S; Beliveau BJ; Fudenberg G; Imakaev M; Mirny LA; Wu CT; Zhuang X
    Nature; 2016 Jan; 529(7586):418-22. PubMed ID: 26760202
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Active chromatin and transcription play a key role in chromosome partitioning into topologically associating domains.
    Ulianov SV; Khrameeva EE; Gavrilov AA; Flyamer IM; Kos P; Mikhaleva EA; Penin AA; Logacheva MD; Imakaev MV; Chertovich A; Gelfand MS; Shevelyov YY; Razin SV
    Genome Res; 2016 Jan; 26(1):70-84. PubMed ID: 26518482
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Macromolecular crowding: chemistry and physics meet biology (Ascona, Switzerland, 10-14 June 2012).
    Foffi G; Pastore A; Piazza F; Temussi PA
    Phys Biol; 2013 Aug; 10(4):040301. PubMed ID: 23912807
    [TBL] [Abstract][Full Text] [Related]  

  • 6. How epigenome drives chromatin folding and dynamics, insights from efficient coarse-grained models of chromosomes.
    Ghosh SK; Jost D
    PLoS Comput Biol; 2018 May; 14(5):e1006159. PubMed ID: 29813054
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Order and stochasticity in the folding of individual Drosophila genomes.
    Ulianov SV; Zakharova VV; Galitsyna AA; Kos PI; Polovnikov KE; Flyamer IM; Mikhaleva EA; Khrameeva EE; Germini D; Logacheva MD; Gavrilov AA; Gorsky AS; Nechaev SK; Gelfand MS; Vassetzky YS; Chertovich AV; Shevelyov YY; Razin SV
    Nat Commun; 2021 Jan; 12(1):41. PubMed ID: 33397980
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Painting a Clearer Picture of Chromatin.
    Finn EH; Misteli T; Shachar S
    Dev Cell; 2016 Feb; 36(4):356-7. PubMed ID: 26906730
    [TBL] [Abstract][Full Text] [Related]  

  • 9. 4C-seq characterization of Drosophila BEAF binding regions provides evidence for highly variable long-distance interactions between active chromatin.
    Shrestha S; Oh DH; McKowen JK; Dassanayake M; Hart CM
    PLoS One; 2018; 13(9):e0203843. PubMed ID: 30248133
    [TBL] [Abstract][Full Text] [Related]  

  • 10. The multiscale effects of polycomb mechanisms on 3D chromatin folding.
    Cheutin T; Cavalli G
    Crit Rev Biochem Mol Biol; 2019 Oct; 54(5):399-417. PubMed ID: 31698957
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Exploring the 2D and 3D structural properties of topologically associating domains.
    Liu T; Wang Z
    BMC Bioinformatics; 2019 Dec; 20(Suppl 16):592. PubMed ID: 31787081
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Modeling epigenome folding: formation and dynamics of topologically associated chromatin domains.
    Jost D; Carrivain P; Cavalli G; Vaillant C
    Nucleic Acids Res; 2014 Sep; 42(15):9553-61. PubMed ID: 25092923
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Unraveling the mechanisms of chromatin fibril packaging.
    Gavrilov AA; Shevelyov YY; Ulianov SV; Khrameeva EE; Kos P; Chertovich A; Razin SV
    Nucleus; 2016 May; 7(3):319-24. PubMed ID: 27249516
    [TBL] [Abstract][Full Text] [Related]  

  • 14. TADs are 3D structural units of higher-order chromosome organization in
    Szabo Q; Jost D; Chang JM; Cattoni DI; Papadopoulos GL; Bonev B; Sexton T; Gurgo J; Jacquier C; Nollmann M; Bantignies F; Cavalli G
    Sci Adv; 2018 Feb; 4(2):eaar8082. PubMed ID: 29503869
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Revisiting the organization of Polycomb-repressed domains: 3D chromatin models from Hi-C compared with super-resolution imaging.
    Liu L; Hyeon C
    Nucleic Acids Res; 2020 Nov; 48(20):11486-11494. PubMed ID: 33095877
    [TBL] [Abstract][Full Text] [Related]  

  • 16. TADs enriched in histone H1.2 strongly overlap with the B compartment, inaccessible chromatin, and AT-rich Giemsa bands.
    Serna-Pujol N; Salinas-Pena M; Mugianesi F; Lopez-Anguita N; Torrent-Llagostera F; Izquierdo-Bouldstridge A; Marti-Renom MA; Jordan A
    FEBS J; 2021 Mar; 288(6):1989-2013. PubMed ID: 32896099
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Quantitative differences in TAD border strength underly the TAD hierarchy in Drosophila chromosomes.
    Luzhin AV; Flyamer IM; Khrameeva EE; Ulianov SV; Razin SV; Gavrilov AA
    J Cell Biochem; 2019 Mar; 120(3):4494-4503. PubMed ID: 30260021
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Evolutionarily Conserved Principles Predict 3D Chromatin Organization.
    Rowley MJ; Nichols MH; Lyu X; Ando-Kuri M; Rivera ISM; Hermetz K; Wang P; Ruan Y; Corces VG
    Mol Cell; 2017 Sep; 67(5):837-852.e7. PubMed ID: 28826674
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Chromatin organization by an interplay of loop extrusion and compartmental segregation.
    Nuebler J; Fudenberg G; Imakaev M; Abdennur N; Mirny LA
    Proc Natl Acad Sci U S A; 2018 Jul; 115(29):E6697-E6706. PubMed ID: 29967174
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Spatial density of open chromatin: an effective metric for the functional characterization of topologically associated domains.
    Jiang S; Li H; Hong H; Du G; Huang X; Sun Y; Wang J; Tao H; Xu K; Li C; Chen Y; Chen H; Bo X
    Brief Bioinform; 2021 May; 22(3):. PubMed ID: 32987404
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.