These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

143 related articles for article (PubMed ID: 31095975)

  • 21. Improved PCR diagnostics using up-to-date in silico validation: An F-gene RT-qPCR assay for the detection of all four lineages of peste des petits ruminants virus.
    Flannery J; Rajko-Nenow P; Arnold H; van Weezep E; van Rijn PA; Ngeleja C; Batten C
    J Virol Methods; 2019 Dec; 274():113735. PubMed ID: 31526766
    [TBL] [Abstract][Full Text] [Related]  

  • 22. In silico fingerprinting (ISIF): a user-friendly in silico AFLP program.
    Paris M; Després L
    Methods Mol Biol; 2012; 888():55-64. PubMed ID: 22665275
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Palindromic sequence-targeted (PST) PCR: a rapid and efficient method for high-throughput gene characterization and genome walking.
    Kalendar R; Shustov AV; Seppänen MM; Schulman AH; Stoddard FL
    Sci Rep; 2019 Nov; 9(1):17707. PubMed ID: 31776407
    [TBL] [Abstract][Full Text] [Related]  

  • 24. In Silico PCR Tools for a Fast Primer, Probe, and Advanced Searching.
    Kalendar R; Muterko A; Shamekova M; Zhambakin K
    Methods Mol Biol; 2017; 1620():1-31. PubMed ID: 28540697
    [TBL] [Abstract][Full Text] [Related]  

  • 25. MultiPLX: automatic grouping and evaluation of PCR primers.
    Kaplinski L; Remm M
    Methods Mol Biol; 2007; 402():287-304. PubMed ID: 17951801
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Primer design for large scale sequencing.
    Haas S; Vingron M; Poustka A; Wiemann S
    Nucleic Acids Res; 1998 Jun; 26(12):3006-12. PubMed ID: 9611248
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Analysing 454 amplicon resequencing experiments using the modular and database oriented Variant Identification Pipeline.
    De Schrijver JM; De Leeneer K; Lefever S; Sabbe N; Pattyn F; Van Nieuwerburgh F; Coucke P; Deforce D; Vandesompele J; Bekaert S; Hellemans J; Van Criekinge W
    BMC Bioinformatics; 2010 May; 11():269. PubMed ID: 20487544
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Application of whole genome data for in silico evaluation of primers and probes routinely employed for the detection of viral species by RT-qPCR using dengue virus as a case study.
    Vanneste K; Garlant L; Broeders S; Van Gucht S; Roosens NH
    BMC Bioinformatics; 2018 Sep; 19(1):312. PubMed ID: 30180800
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Comprehensive and relaxed search for oligonucleotide signatures in hierarchically clustered sequence datasets.
    Bader KC; Grothoff C; Meier H
    Bioinformatics; 2011 Jun; 27(11):1546-54. PubMed ID: 21471017
    [TBL] [Abstract][Full Text] [Related]  

  • 30. QuantPrime--a flexible tool for reliable high-throughput primer design for quantitative PCR.
    Arvidsson S; Kwasniewski M; Riaño-Pachón DM; Mueller-Roeber B
    BMC Bioinformatics; 2008 Nov; 9():465. PubMed ID: 18976492
    [TBL] [Abstract][Full Text] [Related]  

  • 31. PrimerMapper: high throughput primer design and graphical assembly for PCR and SNP detection.
    O'Halloran DM
    Sci Rep; 2016 Feb; 6():20631. PubMed ID: 26853558
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Preparing a re-sequencing DNA library of 2 cancer candidate genes using the ligation-by-amplification protocol by two PCR reactions.
    Su Y; Lin L; Tian G; Chen C; Liu T; Xu X; Qi X; Zhang X; Yang H
    Sci China C Life Sci; 2009 May; 52(5):483-91. PubMed ID: 19471873
    [TBL] [Abstract][Full Text] [Related]  

  • 33. MethPrimer: designing primers for methylation PCRs.
    Li LC; Dahiya R
    Bioinformatics; 2002 Nov; 18(11):1427-31. PubMed ID: 12424112
    [TBL] [Abstract][Full Text] [Related]  

  • 34. The PCR-SSP Manager computer program: a tool for maintaining sequence alignments and automatically updating the specificities of PCR-SSP primers and primer mixes.
    Bunce M; Barnardo MC; Welsh KI
    Tissue Antigens; 1998 Aug; 52(2):158-74. PubMed ID: 9756405
    [TBL] [Abstract][Full Text] [Related]  

  • 35. MuPlex: multi-objective multiplex PCR assay design.
    Rachlin J; Ding C; Cantor C; Kasif S
    Nucleic Acids Res; 2005 Jul; 33(Web Server issue):W544-7. PubMed ID: 15980531
    [TBL] [Abstract][Full Text] [Related]  

  • 36. AutoCloner: automatic homologue-specific primer design for full-gene cloning in polyploids.
    Coulton A; Edwards KJ
    BMC Bioinformatics; 2020 Jul; 21(1):311. PubMed ID: 32677889
    [TBL] [Abstract][Full Text] [Related]  

  • 37. A novel approach to sequence validating protein expression clones with automated decision making.
    Taycher E; Rolfs A; Hu Y; Zuo D; Mohr SE; Williamson J; Labaer J
    BMC Bioinformatics; 2007 Jun; 8():198. PubMed ID: 17567908
    [TBL] [Abstract][Full Text] [Related]  

  • 38. tarSVM: Improving the accuracy of variant calls derived from microfluidic PCR-based targeted next generation sequencing using a support vector machine.
    Gillies CE; Otto EA; Vega-Warner V; Robertson CC; Sanna-Cherchi S; Gharavi A; Crawford B; Bhimma R; Winkler C; ; ; Kang HM; Sampson MG
    BMC Bioinformatics; 2016 Jun; 17(1):233. PubMed ID: 27287006
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Recommendations for the Use of in Silico Approaches for Next-Generation Sequencing Bioinformatic Pipeline Validation: A Joint Report of the Association for Molecular Pathology, Association for Pathology Informatics, and College of American Pathologists.
    Duncavage EJ; Coleman JF; de Baca ME; Kadri S; Leon A; Routbort M; Roy S; Suarez CJ; Vanderbilt C; Zook JM
    J Mol Diagn; 2023 Jan; 25(1):3-16. PubMed ID: 36244574
    [TBL] [Abstract][Full Text] [Related]  

  • 40. methBLAST and methPrimerDB: web-tools for PCR based methylation analysis.
    Pattyn F; Hoebeeck J; Robbrecht P; Michels E; De Paepe A; Bottu G; Coornaert D; Herzog R; Speleman F; Vandesompele J
    BMC Bioinformatics; 2006 Nov; 7():496. PubMed ID: 17094804
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 8.