BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

710 related articles for article (PubMed ID: 31127704)

  • 1. VCF-Server: A web-based visualization tool for high-throughput variant data mining and management.
    Jiang J; Gu J; Zhao T; Lu H
    Mol Genet Genomic Med; 2019 Jul; 7(7):e00641. PubMed ID: 31127704
    [TBL] [Abstract][Full Text] [Related]  

  • 2. VCF-Miner: GUI-based application for mining variants and annotations stored in VCF files.
    Hart SN; Duffy P; Quest DJ; Hossain A; Meiners MA; Kocher JP
    Brief Bioinform; 2016 Mar; 17(2):346-51. PubMed ID: 26210358
    [TBL] [Abstract][Full Text] [Related]  

  • 3. VCF.Filter: interactive prioritization of disease-linked genetic variants from sequencing data.
    Müller H; Jimenez-Heredia R; Krolo A; Hirschmugl T; Dmytrus J; Boztug K; Bock C
    Nucleic Acids Res; 2017 Jul; 45(W1):W567-W572. PubMed ID: 28520890
    [TBL] [Abstract][Full Text] [Related]  

  • 4. DaMold: A data-mining platform for variant annotation and visualization in molecular diagnostics research.
    Pandey RV; Pabinger S; Kriegner A; Weinhäusel A
    Hum Mutat; 2017 Jul; 38(7):778-787. PubMed ID: 28397319
    [TBL] [Abstract][Full Text] [Related]  

  • 5. 123VCF: an intuitive and efficient tool for filtering VCF files.
    Eidi M; Abdolalizadeh S; Moeini S; Garshasbi M; Zahiri J
    BMC Bioinformatics; 2024 Feb; 25(1):68. PubMed ID: 38350858
    [TBL] [Abstract][Full Text] [Related]  

  • 6. myVCF: a desktop application for high-throughput mutations data management.
    Pietrelli A; Valenti L
    Bioinformatics; 2017 Nov; 33(22):3676-3678. PubMed ID: 29036298
    [TBL] [Abstract][Full Text] [Related]  

  • 7. SNVerGUI: a desktop tool for variant analysis of next-generation sequencing data.
    Wang W; Hu W; Hou F; Hu P; Wei Z
    J Med Genet; 2012 Dec; 49(12):753-5. PubMed ID: 23024288
    [TBL] [Abstract][Full Text] [Related]  

  • 8. The Allele Catalog Tool: a web-based interactive tool for allele discovery and analysis.
    Chan YO; Dietz N; Zeng S; Wang J; Flint-Garcia S; Salazar-Vidal MN; Škrabišová M; Bilyeu K; Joshi T
    BMC Genomics; 2023 Mar; 24(1):107. PubMed ID: 36899307
    [TBL] [Abstract][Full Text] [Related]  

  • 9. BrowseVCF: a web-based application and workflow to quickly prioritize disease-causative variants in VCF files.
    Salatino S; Ramraj V
    Brief Bioinform; 2017 Sep; 18(5):774-779. PubMed ID: 27373737
    [TBL] [Abstract][Full Text] [Related]  

  • 10. re-Searcher: GUI-based bioinformatics tool for simplified genomics data mining of VCF files.
    Karabayev D; Molkenov A; Yerulanuly K; Kabimoldayev I; Daniyarov A; Sharip A; Seisenova A; Zhumadilov Z; Kairov U
    PeerJ; 2021; 9():e11333. PubMed ID: 33987016
    [TBL] [Abstract][Full Text] [Related]  

  • 11. GrabBlur--a framework to facilitate the secure exchange of whole-exome and -genome SNV data using VCF files.
    Stade B; Seelow D; Thomsen I; Krawczak M; Franke A
    BMC Genomics; 2014; 15 Suppl 4(Suppl 4):S8. PubMed ID: 25055742
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Var2GO: a web-based tool for gene variants selection.
    Granata I; Sangiovanni M; Maiorano F; Miele M; Guarracino MR
    BMC Bioinformatics; 2016 Nov; 17(Suppl 12):376. PubMed ID: 28185576
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Variant Ranker: a web-tool to rank genomic data according to functional significance.
    Alexander J; Mantzaris D; Georgitsi M; Drineas P; Paschou P
    BMC Bioinformatics; 2017 Jul; 18(1):341. PubMed ID: 28716001
    [TBL] [Abstract][Full Text] [Related]  

  • 14. VCF-Explorer: filtering and analysing whole genome VCF files.
    Akgün M; Demirci H
    Bioinformatics; 2017 Nov; 33(21):3468-3470. PubMed ID: 29036499
    [TBL] [Abstract][Full Text] [Related]  

  • 15. SnpHub: an easy-to-set-up web server framework for exploring large-scale genomic variation data in the post-genomic era with applications in wheat.
    Wang W; Wang Z; Li X; Ni Z; Hu Z; Xin M; Peng H; Yao Y; Sun Q; Guo W
    Gigascience; 2020 Jun; 9(6):. PubMed ID: 32501478
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Variant Tool Chest: an improved tool to analyze and manipulate variant call format (VCF) files.
    Ebbert MT; Wadsworth ME; Boehme KL; Hoyt KL; Sharp AR; O'Fallon BD; Kauwe JS; Ridge PG
    BMC Bioinformatics; 2014; 15 Suppl 7(Suppl 7):S12. PubMed ID: 25080132
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Genomic variant annotation and prioritization with ANNOVAR and wANNOVAR.
    Yang H; Wang K
    Nat Protoc; 2015 Oct; 10(10):1556-66. PubMed ID: 26379229
    [TBL] [Abstract][Full Text] [Related]  

  • 18. iVar, an Interpretation-Oriented Tool to Manage the Update and Revision of Variant Annotation and Classification.
    Castellano S; Cestari F; Faglioni G; Tenedini E; Marino M; Artuso L; Manfredini R; Luppi M; Trenti T; Tagliafico E
    Genes (Basel); 2021 Mar; 12(3):. PubMed ID: 33800487
    [TBL] [Abstract][Full Text] [Related]  

  • 19. VCFshiny: an R/Shiny application for interactively analyzing and visualizing genetic variants.
    Chen T; Tang C; Zheng W; Qian Y; Chen M; Zou Q; Jin Y; Wang K; Zhou X; Gou S; Lai L
    Bioinform Adv; 2023; 3(1):vbad107. PubMed ID: 37701675
    [TBL] [Abstract][Full Text] [Related]  

  • 20. AMLVaran: a software approach to implement variant analysis of targeted NGS sequencing data in an oncological care setting.
    Wünsch C; Banck H; Müller-Tidow C; Dugas M
    BMC Med Genomics; 2020 Feb; 13(1):17. PubMed ID: 32019565
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 36.