125 related articles for article (PubMed ID: 31128158)
1. Nuclei of HeLa cells interactomes unravel a network of ghost proteins involved in proteins translation.
Cardon T; Salzet M; Franck J; Fournier I
Biochim Biophys Acta Gen Subj; 2019 Oct; 1863(10):1458-1470. PubMed ID: 31128158
[TBL] [Abstract][Full Text] [Related]
2. Shedding Light on the Ghost Proteome.
Cardon T; Fournier I; Salzet M
Trends Biochem Sci; 2021 Mar; 46(3):239-250. PubMed ID: 33246829
[TBL] [Abstract][Full Text] [Related]
3. The Protein Coded by a Short Open Reading Frame, Not by the Annotated Coding Sequence, Is the Main Gene Product of the Dual-Coding Gene
Delcourt V; Brunelle M; Roy AV; Jacques JF; Salzet M; Fournier I; Roucou X
Mol Cell Proteomics; 2018 Dec; 17(12):2402-2411. PubMed ID: 30181344
[TBL] [Abstract][Full Text] [Related]
4. PROTEOFORMER: deep proteome coverage through ribosome profiling and MS integration.
Crappé J; Ndah E; Koch A; Steyaert S; Gawron D; De Keulenaer S; De Meester E; De Meyer T; Van Criekinge W; Van Damme P; Menschaert G
Nucleic Acids Res; 2015 Mar; 43(5):e29. PubMed ID: 25510491
[TBL] [Abstract][Full Text] [Related]
5. Direct detection of alternative open reading frames translation products in human significantly expands the proteome.
Vanderperre B; Lucier JF; Bissonnette C; Motard J; Tremblay G; Vanderperre S; Wisztorski M; Salzet M; Boisvert FM; Roucou X
PLoS One; 2013; 8(8):e70698. PubMed ID: 23950983
[TBL] [Abstract][Full Text] [Related]
6. Ribosomal Protein L10: From Function to Dysfunction.
Pollutri D; Penzo M
Cells; 2020 Nov; 9(11):. PubMed ID: 33227977
[TBL] [Abstract][Full Text] [Related]
7. Small Proteins Encoded by Unannotated ORFs are Rising Stars of the Proteome, Confirming Shortcomings in Genome Annotations and Current Vision of an mRNA.
Delcourt V; Staskevicius A; Salzet M; Fournier I; Roucou X
Proteomics; 2018 May; 18(10):e1700058. PubMed ID: 28627015
[TBL] [Abstract][Full Text] [Related]
8. Translation of Small Open Reading Frames: Roles in Regulation and Evolutionary Innovation.
Ruiz-Orera J; Albà MM
Trends Genet; 2019 Mar; 35(3):186-198. PubMed ID: 30606460
[TBL] [Abstract][Full Text] [Related]
9. HAltORF: a database of predicted out-of-frame alternative open reading frames in human.
Vanderperre B; Lucier JF; Roucou X
Database (Oxford); 2012; 2012():bas025. PubMed ID: 22613085
[TBL] [Abstract][Full Text] [Related]
10. Detecting actively translated open reading frames in ribosome profiling data.
Calviello L; Mukherjee N; Wyler E; Zauber H; Hirsekorn A; Selbach M; Landthaler M; Obermayer B; Ohler U
Nat Methods; 2016 Feb; 13(2):165-70. PubMed ID: 26657557
[TBL] [Abstract][Full Text] [Related]
11. Direct and Indirect Effects on Viral Translation and RNA Replication Are Required for AUF1 Restriction of Enterovirus Infections in Human Cells.
Ullmer W; Semler BL
mBio; 2018 Sep; 9(5):. PubMed ID: 30181254
[TBL] [Abstract][Full Text] [Related]
12. OpenProt: a more comprehensive guide to explore eukaryotic coding potential and proteomes.
Brunet MA; Brunelle M; Lucier JF; Delcourt V; Levesque M; Grenier F; Samandi S; Leblanc S; Aguilar JD; Dufour P; Jacques JF; Fournier I; Ouangraoua A; Scott MS; Boisvert FM; Roucou X
Nucleic Acids Res; 2019 Jan; 47(D1):D403-D410. PubMed ID: 30299502
[TBL] [Abstract][Full Text] [Related]
13. Mass Spectrometry-Based Proteomics Analyses Using the OpenProt Database to Unveil Novel Proteins Translated from Non-Canonical Open Reading Frames.
Brunet MA; Roucou X
J Vis Exp; 2019 Apr; (146):. PubMed ID: 31033953
[TBL] [Abstract][Full Text] [Related]
14. Thousands of novel translated open reading frames in humans inferred by ribosome footprint profiling.
Raj A; Wang SH; Shim H; Harpak A; Li YI; Engelmann B; Stephens M; Gilad Y; Pritchard JK
Elife; 2016 May; 5():. PubMed ID: 27232982
[TBL] [Abstract][Full Text] [Related]
15. The ARE-associated factor AUF1 binds poly(A) in vitro in competition with PABP.
Sagliocco F; Laloo B; Cosson B; Laborde L; Castroviejo M; Rosenbaum J; Ripoche J; Grosset C
Biochem J; 2006 Dec; 400(2):337-47. PubMed ID: 16834569
[TBL] [Abstract][Full Text] [Related]
16. ING4 inhibits the translation of proto-oncogene MYC by interacting with AUF1.
Lu M; Pan C; Zhang L; Ding C; Chen F; Wang Q; Wang K; Zhang X
FEBS Lett; 2013 Jun; 587(11):1597-604. PubMed ID: 23603392
[TBL] [Abstract][Full Text] [Related]
17. A nuclear matrix-associated factor, SAF-B, interacts with specific isoforms of AUF1/hnRNP D.
Arao Y; Kuriyama R; Kayama F; Kato S
Arch Biochem Biophys; 2000 Aug; 380(2):228-36. PubMed ID: 10933876
[TBL] [Abstract][Full Text] [Related]
18. SARS-Cov-2 Interactome with Human Ghost Proteome: A Neglected World Encompassing a Wealth of Biological Data.
Cardon T; Fournier I; Salzet M
Microorganisms; 2020 Dec; 8(12):. PubMed ID: 33352703
[TBL] [Abstract][Full Text] [Related]
19. REPARATION: ribosome profiling assisted (re-)annotation of bacterial genomes.
Ndah E; Jonckheere V; Giess A; Valen E; Menschaert G; Van Damme P
Nucleic Acids Res; 2017 Nov; 45(20):e168. PubMed ID: 28977509
[TBL] [Abstract][Full Text] [Related]
20. Deciphering poxvirus gene expression by RNA sequencing and ribosome profiling.
Yang Z; Cao S; Martens CA; Porcella SF; Xie Z; Ma M; Shen B; Moss B
J Virol; 2015 Jul; 89(13):6874-86. PubMed ID: 25903347
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
