217 related articles for article (PubMed ID: 31165139)
1. Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms.
Zyla J; Marczyk M; Domaszewska T; Kaufmann SHE; Polanska J; Weiner J
Bioinformatics; 2019 Dec; 35(24):5146-5154. PubMed ID: 31165139
[TBL] [Abstract][Full Text] [Related]
2. Importance of SNP Dependency Correction and Association Integration for Gene Set Analysis in Genome-Wide Association Studies.
Marczyk M; Macioszek A; Tobiasz J; Polanska J; Zyla J
Front Genet; 2021; 12():767358. PubMed ID: 34956320
[TBL] [Abstract][Full Text] [Related]
3. Deviance residuals-based sparse PLS and sparse kernel PLS regression for censored data.
Bastien P; Bertrand F; Meyer N; Maumy-Bertrand M
Bioinformatics; 2015 Feb; 31(3):397-404. PubMed ID: 25286920
[TBL] [Abstract][Full Text] [Related]
4. RANKS: a flexible tool for node label ranking and classification in biological networks.
Valentini G; Armano G; Frasca M; Lin J; Mesiti M; Re M
Bioinformatics; 2016 Sep; 32(18):2872-4. PubMed ID: 27256314
[TBL] [Abstract][Full Text] [Related]
5. Rediscover: an R package to identify mutually exclusive mutations.
Ferrer-Bonsoms JA; Jareno L; Rubio A
Bioinformatics; 2022 Jan; 38(3):844-845. PubMed ID: 34664620
[TBL] [Abstract][Full Text] [Related]
6. MetaCycle: an integrated R package to evaluate periodicity in large scale data.
Wu G; Anafi RC; Hughes ME; Kornacker K; Hogenesch JB
Bioinformatics; 2016 Nov; 32(21):3351-3353. PubMed ID: 27378304
[TBL] [Abstract][Full Text] [Related]
7. selectBoost: a general algorithm to enhance the performance of variable selection methods.
Bertrand F; Aouadi I; Jung N; Carapito R; Vallat L; Bahram S; Maumy-Bertrand M
Bioinformatics; 2021 May; 37(5):659-668. PubMed ID: 33016991
[TBL] [Abstract][Full Text] [Related]
8. NEArender: an R package for functional interpretation of 'omics' data via network enrichment analysis.
Jeggari A; Alexeyenko A
BMC Bioinformatics; 2017 Mar; 18(Suppl 5):118. PubMed ID: 28361684
[TBL] [Abstract][Full Text] [Related]
9. Spathial: an R package for the evolutionary analysis of biological data.
Gardini E; Giorgi FM; Decherchi S; Cavalli A
Bioinformatics; 2020 Nov; 36(17):4664-4667. PubMed ID: 32437522
[TBL] [Abstract][Full Text] [Related]
10. synbreed: a framework for the analysis of genomic prediction data using R.
Wimmer V; Albrecht T; Auinger HJ; Schön CC
Bioinformatics; 2012 Aug; 28(15):2086-7. PubMed ID: 22689388
[TBL] [Abstract][Full Text] [Related]
11. compendiumdb: an R package for retrieval and storage of functional genomics data.
Nandal UK; van Kampen AH; Moerland PD
Bioinformatics; 2016 Sep; 32(18):2856-7. PubMed ID: 27323392
[TBL] [Abstract][Full Text] [Related]
12. sfinx: an R package for the elimination of false positives from affinity purification-mass spectrometry datasets.
Titeca K; Meysman P; Laukens K; Martens L; Tavernier J; Eyckerman S
Bioinformatics; 2017 Jun; 33(12):1902-1904. PubMed ID: 28186257
[TBL] [Abstract][Full Text] [Related]
13. Ranking metrics in gene set enrichment analysis: do they matter?
Zyla J; Marczyk M; Weiner J; Polanska J
BMC Bioinformatics; 2017 May; 18(1):256. PubMed ID: 28499413
[TBL] [Abstract][Full Text] [Related]
14. Combining multiple tools outperforms individual methods in gene set enrichment analyses.
Alhamdoosh M; Ng M; Wilson NJ; Sheridan JM; Huynh H; Wilson MJ; Ritchie ME
Bioinformatics; 2017 Feb; 33(3):414-424. PubMed ID: 27694195
[TBL] [Abstract][Full Text] [Related]
15. GSEApy: a comprehensive package for performing gene set enrichment analysis in Python.
Fang Z; Liu X; Peltz G
Bioinformatics; 2023 Jan; 39(1):. PubMed ID: 36426870
[TBL] [Abstract][Full Text] [Related]
16. KODAMA: an R package for knowledge discovery and data mining.
Cacciatore S; Tenori L; Luchinat C; Bennett PR; MacIntyre DA
Bioinformatics; 2017 Feb; 33(4):621-623. PubMed ID: 27993774
[TBL] [Abstract][Full Text] [Related]
17. Bayesian network feature finder (BANFF): an R package for gene network feature selection.
Lan Z; Zhao Y; Kang J; Yu T
Bioinformatics; 2016 Dec; 32(23):3685-3687. PubMed ID: 27503223
[TBL] [Abstract][Full Text] [Related]
18. Biomartr: genomic data retrieval with R.
Drost HG; Paszkowski J
Bioinformatics; 2017 Apr; 33(8):1216-1217. PubMed ID: 28110292
[TBL] [Abstract][Full Text] [Related]
19. The optimal discovery procedure for significance analysis of general gene expression studies.
Bass AJ; Storey JD
Bioinformatics; 2021 Apr; 37(3):367-374. PubMed ID: 32818252
[TBL] [Abstract][Full Text] [Related]
20. Phantom: investigating heterogeneous gene sets in time-course data.
Gu J; Wang X; Chan J; Baldwin NE; Turner JA
Bioinformatics; 2017 Sep; 33(18):2957-2959. PubMed ID: 28595310
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
