314 related articles for article (PubMed ID: 31165883)
1. WashU Epigenome Browser update 2019.
Li D; Hsu S; Purushotham D; Sears RL; Wang T
Nucleic Acids Res; 2019 Jul; 47(W1):W158-W165. PubMed ID: 31165883
[TBL] [Abstract][Full Text] [Related]
2. WashU Epigenome Browser update 2022.
Li D; Purushotham D; Harrison JK; Hsu S; Zhuo X; Fan C; Liu S; Xu V; Chen S; Xu J; Ouyang S; Wu AS; Wang T
Nucleic Acids Res; 2022 Jul; 50(W1):W774-W781. PubMed ID: 35412637
[TBL] [Abstract][Full Text] [Related]
3. methylC Track: visual integration of single-base resolution DNA methylation data on the WashU EpiGenome Browser.
Zhou X; Li D; Lowdon RF; Costello JF; Wang T
Bioinformatics; 2014 Aug; 30(15):2206-7. PubMed ID: 24728854
[TBL] [Abstract][Full Text] [Related]
4. Comparing genomic and epigenomic features across species using the WashU Comparative Epigenome Browser.
Zhuo X; Hsu S; Purushotham D; Kuntala PK; Harrison JK; Du AY; Chen S; Li D; Wang T
Genome Res; 2023 May; 33(5):824-835. PubMed ID: 37156621
[TBL] [Abstract][Full Text] [Related]
5. The qBED track: a novel genome browser visualization for point processes.
Moudgil A; Li D; Hsu S; Purushotham D; Wang T; Mitra RD
Bioinformatics; 2021 May; 37(8):1168-1170. PubMed ID: 32941613
[TBL] [Abstract][Full Text] [Related]
6. The International Human Epigenome Consortium Data Portal.
Bujold D; Morais DAL; Gauthier C; Côté C; Caron M; Kwan T; Chen KC; Laperle J; Markovits AN; Pastinen T; Caron B; Veilleux A; Jacques PÉ; Bourque G
Cell Syst; 2016 Nov; 3(5):496-499.e2. PubMed ID: 27863956
[TBL] [Abstract][Full Text] [Related]
7. Using the Wash U Epigenome Browser to examine genome-wide sequencing data.
Zhou X; Wang T
Curr Protoc Bioinformatics; 2012 Dec; Chapter 10():10.10.1-10.10.14. PubMed ID: 23255151
[TBL] [Abstract][Full Text] [Related]
8. The UCSC Genome Browser database: 2019 update.
Haeussler M; Zweig AS; Tyner C; Speir ML; Rosenbloom KR; Raney BJ; Lee CM; Lee BT; Hinrichs AS; Gonzalez JN; Gibson D; Diekhans M; Clawson H; Casper J; Barber GP; Haussler D; Kuhn RM; Kent WJ
Nucleic Acids Res; 2019 Jan; 47(D1):D853-D858. PubMed ID: 30407534
[TBL] [Abstract][Full Text] [Related]
9. EpiCompare: an online tool to define and explore genomic regions with tissue or cell type-specific epigenomic features.
He Y; Wang T
Bioinformatics; 2017 Oct; 33(20):3268-3275. PubMed ID: 28605501
[TBL] [Abstract][Full Text] [Related]
10. Modbed track: Visualization of modified bases in single-molecule sequencing.
Li D; Zhuo X; Harrison JK; Liu S; Wang T
Cell Genom; 2023 Dec; 3(12):100455. PubMed ID: 38116122
[TBL] [Abstract][Full Text] [Related]
11. EpiAlignment: alignment with both DNA sequence and epigenomic data.
Lu J; Cao X; Zhong S
Nucleic Acids Res; 2019 Jul; 47(W1):W11-W19. PubMed ID: 31114924
[TBL] [Abstract][Full Text] [Related]
12. Epigenomic annotation of genetic variants using the Roadmap Epigenome Browser.
Zhou X; Li D; Zhang B; Lowdon RF; Rockweiler NB; Sears RL; Madden PA; Smirnov I; Costello JF; Wang T
Nat Biotechnol; 2015 Apr; 33(4):345-6. PubMed ID: 25690851
[No Abstract] [Full Text] [Related]
13. The UCSC Genome Browser database: 2022 update.
Lee BT; Barber GP; Benet-Pagès A; Casper J; Clawson H; Diekhans M; Fischer C; Gonzalez JN; Hinrichs AS; Lee CM; Muthuraman P; Nassar LR; Nguy B; Pereira T; Perez G; Raney BJ; Rosenbloom KR; Schmelter D; Speir ML; Wick BD; Zweig AS; Haussler D; Kuhn RM; Haeussler M; Kent WJ
Nucleic Acids Res; 2022 Jan; 50(D1):D1115-D1122. PubMed ID: 34718705
[TBL] [Abstract][Full Text] [Related]
14. EpiVar Browser: advanced exploration of epigenomics data under controlled access.
Lougheed DR; Liu H; Aracena KA; Grégoire R; Pacis A; Pastinen T; Barreiro LB; Joly Y; Bujold D; Bourque G
Bioinformatics; 2024 Mar; 40(3):. PubMed ID: 38449289
[TBL] [Abstract][Full Text] [Related]
15. The UCSC Genome Browser database: 2018 update.
Casper J; Zweig AS; Villarreal C; Tyner C; Speir ML; Rosenbloom KR; Raney BJ; Lee CM; Lee BT; Karolchik D; Hinrichs AS; Haeussler M; Guruvadoo L; Navarro Gonzalez J; Gibson D; Fiddes IT; Eisenhart C; Diekhans M; Clawson H; Barber GP; Armstrong J; Haussler D; Kuhn RM; Kent WJ
Nucleic Acids Res; 2018 Jan; 46(D1):D762-D769. PubMed ID: 29106570
[TBL] [Abstract][Full Text] [Related]
16. EpiExplorer: live exploration and global analysis of large epigenomic datasets.
Halachev K; Bast H; Albrecht F; Lengauer T; Bock C
Genome Biol; 2012 Oct; 13(10):R96. PubMed ID: 23034089
[TBL] [Abstract][Full Text] [Related]
17. DeepBlue epigenomic data server: programmatic data retrieval and analysis of epigenome region sets.
Albrecht F; List M; Bock C; Lengauer T
Nucleic Acids Res; 2016 Jul; 44(W1):W581-6. PubMed ID: 27084938
[TBL] [Abstract][Full Text] [Related]
18. Search and comparison of (epi)genomic feature patterns in multiple genome browser tracks.
Ceol A; Montanari P; Bartolini I; Ceri S; Ciaccia P; Patella M; Masseroli M
BMC Bioinformatics; 2020 Oct; 21(1):464. PubMed ID: 33076821
[TBL] [Abstract][Full Text] [Related]
19. The BLUEPRINT Data Analysis Portal.
Fernández JM; de la Torre V; Richardson D; Royo R; Puiggròs M; Moncunill V; Fragkogianni S; Clarke L; ; Flicek P; Rico D; Torrents D; Carrillo de Santa Pau E; Valencia A
Cell Syst; 2016 Nov; 3(5):491-495.e5. PubMed ID: 27863955
[TBL] [Abstract][Full Text] [Related]
20. RNASeqBrowser: a genome browser for simultaneous visualization of raw strand specific RNAseq reads and UCSC genome browser custom tracks.
An J; Lai J; Wood DL; Sajjanhar A; Wang C; Tevz G; Lehman ML; Nelson CC
BMC Genomics; 2015 Mar; 16(1):145. PubMed ID: 25766521
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]