These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

314 related articles for article (PubMed ID: 31165883)

  • 21. STAR: an integrated solution to management and visualization of sequencing data.
    Wang T; Liu J; Shen L; Tonti-Filippini J; Zhu Y; Jia H; Lister R; Whitaker JW; Ecker JR; Millar AH; Ren B; Wang W
    Bioinformatics; 2013 Dec; 29(24):3204-10. PubMed ID: 24078702
    [TBL] [Abstract][Full Text] [Related]  

  • 22. The UCSC Cancer Genomics Browser: update 2013.
    Goldman M; Craft B; Swatloski T; Ellrott K; Cline M; Diekhans M; Ma S; Wilks C; Stuart J; Haussler D; Zhu J
    Nucleic Acids Res; 2013 Jan; 41(Database issue):D949-54. PubMed ID: 23109555
    [TBL] [Abstract][Full Text] [Related]  

  • 23. The epiGenomic Efficient Correlator (epiGeEC) tool allows fast comparison of user datasets with thousands of public epigenomic datasets.
    Laperle J; Hébert-Deschamps S; Raby J; de Lima Morais DA; Barrette M; Bujold D; Bastin C; Robert MA; Nadeau JF; Harel M; Nordell-Markovits A; Veilleux A; Bourque G; Jacques PÉ
    Bioinformatics; 2019 Feb; 35(4):674-676. PubMed ID: 30052804
    [TBL] [Abstract][Full Text] [Related]  

  • 24. ABrowse--a customizable next-generation genome browser framework.
    Kong L; Wang J; Zhao S; Gu X; Luo J; Gao G
    BMC Bioinformatics; 2012 Jan; 13():2. PubMed ID: 22222089
    [TBL] [Abstract][Full Text] [Related]  

  • 25. PBrowse: a web-based platform for real-time collaborative exploration of genomic data.
    Szot PS; Yang A; Wang X; Parsania C; Röhm U; Wong KH; Ho JWK
    Nucleic Acids Res; 2017 May; 45(9):e67. PubMed ID: 28100700
    [TBL] [Abstract][Full Text] [Related]  

  • 26. The ENCODE Portal as an Epigenomics Resource.
    Jou J; Gabdank I; Luo Y; Lin K; Sud P; Myers Z; Hilton JA; Kagda MS; Lam B; O'Neill E; Adenekan P; Graham K; Baymuradov UK; R Miyasato S; Strattan JS; Jolanki O; Lee JW; Litton C; Y Tanaka F; Hitz BC; Cherry JM
    Curr Protoc Bioinformatics; 2019 Dec; 68(1):e89. PubMed ID: 31751002
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Ensembl 2018.
    Zerbino DR; Achuthan P; Akanni W; Amode MR; Barrell D; Bhai J; Billis K; Cummins C; Gall A; Girón CG; Gil L; Gordon L; Haggerty L; Haskell E; Hourlier T; Izuogu OG; Janacek SH; Juettemann T; To JK; Laird MR; Lavidas I; Liu Z; Loveland JE; Maurel T; McLaren W; Moore B; Mudge J; Murphy DN; Newman V; Nuhn M; Ogeh D; Ong CK; Parker A; Patricio M; Riat HS; Schuilenburg H; Sheppard D; Sparrow H; Taylor K; Thormann A; Vullo A; Walts B; Zadissa A; Frankish A; Hunt SE; Kostadima M; Langridge N; Martin FJ; Muffato M; Perry E; Ruffier M; Staines DM; Trevanion SJ; Aken BL; Cunningham F; Yates A; Flicek P
    Nucleic Acids Res; 2018 Jan; 46(D1):D754-D761. PubMed ID: 29155950
    [TBL] [Abstract][Full Text] [Related]  

  • 28. The Ensembl Genome Browser: Strategies for Accessing Eukaryotic Genome Data.
    Newman V; Moore B; Sparrow H; Perry E
    Methods Mol Biol; 2018; 1757():115-139. PubMed ID: 29761458
    [TBL] [Abstract][Full Text] [Related]  

  • 29. CFEA: a cell-free epigenome atlas in human diseases.
    Yu F; Li K; Li S; Liu J; Zhang Y; Zhou M; Zhao H; Chen H; Wu N; Liu Z; Su J
    Nucleic Acids Res; 2020 Jan; 48(D1):D40-D44. PubMed ID: 31428785
    [TBL] [Abstract][Full Text] [Related]  

  • 30. MakeHub: Fully Automated Generation of UCSC Genome Browser Assembly Hubs.
    Hoff KJ
    Genomics Proteomics Bioinformatics; 2019 Oct; 17(5):546-549. PubMed ID: 32001327
    [TBL] [Abstract][Full Text] [Related]  

  • 31. The UCSC Genome Browser database: 2023 update.
    Nassar LR; Barber GP; Benet-Pagès A; Casper J; Clawson H; Diekhans M; Fischer C; Gonzalez JN; Hinrichs AS; Lee BT; Lee CM; Muthuraman P; Nguy B; Pereira T; Nejad P; Perez G; Raney BJ; Schmelter D; Speir ML; Wick BD; Zweig AS; Haussler D; Kuhn RM; Haeussler M; Kent WJ
    Nucleic Acids Res; 2023 Jan; 51(D1):D1188-D1195. PubMed ID: 36420891
    [TBL] [Abstract][Full Text] [Related]  

  • 32. The UCSC Genome Browser database: 2024 update.
    Raney BJ; Barber GP; Benet-Pagès A; Casper J; Clawson H; Cline MS; Diekhans M; Fischer C; Navarro Gonzalez J; Hickey G; Hinrichs AS; Kuhn RM; Lee BT; Lee CM; Le Mercier P; Miga KH; Nassar LR; Nejad P; Paten B; Perez G; Schmelter D; Speir ML; Wick BD; Zweig AS; Haussler D; Kent WJ; Haeussler M
    Nucleic Acids Res; 2024 Jan; 52(D1):D1082-D1088. PubMed ID: 37953330
    [TBL] [Abstract][Full Text] [Related]  

  • 33. The RCSB protein data bank: integrative view of protein, gene and 3D structural information.
    Rose PW; Prlić A; Altunkaya A; Bi C; Bradley AR; Christie CH; Costanzo LD; Duarte JM; Dutta S; Feng Z; Green RK; Goodsell DS; Hudson B; Kalro T; Lowe R; Peisach E; Randle C; Rose AS; Shao C; Tao YP; Valasatava Y; Voigt M; Westbrook JD; Woo J; Yang H; Young JY; Zardecki C; Berman HM; Burley SK
    Nucleic Acids Res; 2017 Jan; 45(D1):D271-D281. PubMed ID: 27794042
    [TBL] [Abstract][Full Text] [Related]  

  • 34. The UCSC Cancer Genomics Browser: update 2011.
    Sanborn JZ; Benz SC; Craft B; Szeto C; Kober KM; Meyer L; Vaske CJ; Goldman M; Smith KE; Kuhn RM; Karolchik D; Kent WJ; Stuart JM; Haussler D; Zhu J
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D951-9. PubMed ID: 21059681
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Xenbase: a genomic, epigenomic and transcriptomic model organism database.
    Karimi K; Fortriede JD; Lotay VS; Burns KA; Wang DZ; Fisher ME; Pells TJ; James-Zorn C; Wang Y; Ponferrada VG; Chu S; Chaturvedi P; Zorn AM; Vize PD
    Nucleic Acids Res; 2018 Jan; 46(D1):D861-D868. PubMed ID: 29059324
    [TBL] [Abstract][Full Text] [Related]  

  • 36. ENCODE whole-genome data in the UCSC genome browser (2011 update).
    Raney BJ; Cline MS; Rosenbloom KR; Dreszer TR; Learned K; Barber GP; Meyer LR; Sloan CA; Malladi VS; Roskin KM; Suh BB; Hinrichs AS; Clawson H; Zweig AS; Kirkup V; Fujita PA; Rhead B; Smith KE; Pohl A; Kuhn RM; Karolchik D; Haussler D; Kent WJ
    Nucleic Acids Res; 2011 Jan; 39(Database issue):D871-5. PubMed ID: 21037257
    [TBL] [Abstract][Full Text] [Related]  

  • 37. The Encyclopedia of DNA elements (ENCODE): data portal update.
    Davis CA; Hitz BC; Sloan CA; Chan ET; Davidson JM; Gabdank I; Hilton JA; Jain K; Baymuradov UK; Narayanan AK; Onate KC; Graham K; Miyasato SR; Dreszer TR; Strattan JS; Jolanki O; Tanaka FY; Cherry JM
    Nucleic Acids Res; 2018 Jan; 46(D1):D794-D801. PubMed ID: 29126249
    [TBL] [Abstract][Full Text] [Related]  

  • 38. UCSC Genome Browser enters 20th year.
    Lee CM; Barber GP; Casper J; Clawson H; Diekhans M; Gonzalez JN; Hinrichs AS; Lee BT; Nassar LR; Powell CC; Raney BJ; Rosenbloom KR; Schmelter D; Speir ML; Zweig AS; Haussler D; Haeussler M; Kuhn RM; Kent WJ
    Nucleic Acids Res; 2020 Jan; 48(D1):D756-D761. PubMed ID: 31691824
    [TBL] [Abstract][Full Text] [Related]  

  • 39. MoMI-G: modular multi-scale integrated genome graph browser.
    Yokoyama TT; Sakamoto Y; Seki M; Suzuki Y; Kasahara M
    BMC Bioinformatics; 2019 Nov; 20(1):548. PubMed ID: 31690272
    [TBL] [Abstract][Full Text] [Related]  

  • 40. GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome.
    Simovski B; Vodák D; Gundersen S; Domanska D; Azab A; Holden L; Holden M; Grytten I; Rand K; Drabløs F; Johansen M; Mora A; Lund-Andersen C; Fromm B; Eskeland R; Gabrielsen OS; Ferkingstad E; Nakken S; Bengtsen M; Nederbragt AJ; Thorarensen HS; Akse JA; Glad I; Hovig E; Sandve GK
    Gigascience; 2017 Jul; 6(7):1-12. PubMed ID: 28459977
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 16.