396 related articles for article (PubMed ID: 31218353)
1. DeepMito: accurate prediction of protein sub-mitochondrial localization using convolutional neural networks.
Savojardo C; Bruciaferri N; Tartari G; Martelli PL; Casadio R
Bioinformatics; 2020 Jan; 36(1):56-64. PubMed ID: 31218353
[TBL] [Abstract][Full Text] [Related]
2. Large-scale prediction and analysis of protein sub-mitochondrial localization with DeepMito.
Savojardo C; Martelli PL; Tartari G; Casadio R
BMC Bioinformatics; 2020 Sep; 21(Suppl 8):266. PubMed ID: 32938368
[TBL] [Abstract][Full Text] [Related]
3. Computer-Aided Prediction of Protein Mitochondrial Localization.
Martelli PL; Savojardo C; Fariselli P; Tartari G; Casadio R
Methods Mol Biol; 2021; 2275():433-452. PubMed ID: 34118055
[TBL] [Abstract][Full Text] [Related]
4. iDeepSubMito: identification of protein submitochondrial localization with deep learning.
Hou Z; Yang Y; Li H; Wong KC; Li X
Brief Bioinform; 2021 Nov; 22(6):. PubMed ID: 34337657
[TBL] [Abstract][Full Text] [Related]
5. DeepPred-SubMito: A Novel Submitochondrial Localization Predictor Based on Multi-Channel Convolutional Neural Network and Dataset Balancing Treatment.
Wang X; Jin Y; Zhang Q
Int J Mol Sci; 2020 Aug; 21(16):. PubMed ID: 32784927
[TBL] [Abstract][Full Text] [Related]
6. SChloro: directing Viridiplantae proteins to six chloroplastic sub-compartments.
Savojardo C; Martelli PL; Fariselli P; Casadio R
Bioinformatics; 2017 Feb; 33(3):347-353. PubMed ID: 28172591
[TBL] [Abstract][Full Text] [Related]
7. DeepLoc: prediction of protein subcellular localization using deep learning.
Almagro Armenteros JJ; Sønderby CK; Sønderby SK; Nielsen H; Winther O
Bioinformatics; 2017 Nov; 33(21):3387-3395. PubMed ID: 29036616
[TBL] [Abstract][Full Text] [Related]
8. ResPRE: high-accuracy protein contact prediction by coupling precision matrix with deep residual neural networks.
Li Y; Hu J; Zhang C; Yu DJ; Zhang Y
Bioinformatics; 2019 Nov; 35(22):4647-4655. PubMed ID: 31070716
[TBL] [Abstract][Full Text] [Related]
9. DNCON2: improved protein contact prediction using two-level deep convolutional neural networks.
Adhikari B; Hou J; Cheng J
Bioinformatics; 2018 May; 34(9):1466-1472. PubMed ID: 29228185
[TBL] [Abstract][Full Text] [Related]
10. TPpred2: improving the prediction of mitochondrial targeting peptide cleavage sites by exploiting sequence motifs.
Savojardo C; Martelli PL; Fariselli P; Casadio R
Bioinformatics; 2014 Oct; 30(20):2973-4. PubMed ID: 24974200
[TBL] [Abstract][Full Text] [Related]
11. In-Pero: Exploiting Deep Learning Embeddings of Protein Sequences to Predict the Localisation of Peroxisomal Proteins.
Anteghini M; Martins Dos Santos V; Saccenti E
Int J Mol Sci; 2021 Jun; 22(12):. PubMed ID: 34203866
[TBL] [Abstract][Full Text] [Related]
12. BUSCA: an integrative web server to predict subcellular localization of proteins.
Savojardo C; Martelli PL; Fariselli P; Profiti G; Casadio R
Nucleic Acids Res; 2018 Jul; 46(W1):W459-W466. PubMed ID: 29718411
[TBL] [Abstract][Full Text] [Related]
13. MemLoci: predicting subcellular localization of membrane proteins in eukaryotes.
Pierleoni A; Martelli PL; Casadio R
Bioinformatics; 2011 May; 27(9):1224-30. PubMed ID: 21367869
[TBL] [Abstract][Full Text] [Related]
14. CoCoNat: a novel method based on deep learning for coiled-coil prediction.
Madeo G; Savojardo C; Manfredi M; Martelli PL; Casadio R
Bioinformatics; 2023 Aug; 39(8):. PubMed ID: 37540220
[TBL] [Abstract][Full Text] [Related]
15. The prediction of organelle-targeting peptides in eukaryotic proteins with Grammatical-Restrained Hidden Conditional Random Fields.
Indio V; Martelli PL; Savojardo C; Fariselli P; Casadio R
Bioinformatics; 2013 Apr; 29(8):981-8. PubMed ID: 23428638
[TBL] [Abstract][Full Text] [Related]
16. DeepLncLoc: a deep learning framework for long non-coding RNA subcellular localization prediction based on subsequence embedding.
Zeng M; Wu Y; Lu C; Zhang F; Wu FX; Li M
Brief Bioinform; 2022 Jan; 23(1):. PubMed ID: 34498677
[TBL] [Abstract][Full Text] [Related]
17. DeepSig: deep learning improves signal peptide detection in proteins.
Savojardo C; Martelli PL; Fariselli P; Casadio R
Bioinformatics; 2018 May; 34(10):1690-1696. PubMed ID: 29280997
[TBL] [Abstract][Full Text] [Related]
18. An introduction to deep learning on biological sequence data: examples and solutions.
Jurtz VI; Johansen AR; Nielsen M; Almagro Armenteros JJ; Nielsen H; Sønderby CK; Winther O; Sønderby SK
Bioinformatics; 2017 Nov; 33(22):3685-3690. PubMed ID: 28961695
[TBL] [Abstract][Full Text] [Related]
19. TPpred3 detects and discriminates mitochondrial and chloroplastic targeting peptides in eukaryotic proteins.
Savojardo C; Martelli PL; Fariselli P; Casadio R
Bioinformatics; 2015 Oct; 31(20):3269-75. PubMed ID: 26079349
[TBL] [Abstract][Full Text] [Related]
20. DeepPhos: prediction of protein phosphorylation sites with deep learning.
Luo F; Wang M; Liu Y; Zhao XM; Li A
Bioinformatics; 2019 Aug; 35(16):2766-2773. PubMed ID: 30601936
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
