BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

146 related articles for article (PubMed ID: 31231597)

  • 1. Deconstructing the Polymerase Chain Reaction II: an improved workflow and effects on artifact formation and primer degeneracy.
    Naqib A; Poggi S; Green SJ
    PeerJ; 2019; 7():e7121. PubMed ID: 31231597
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Deconstructing the polymerase chain reaction: understanding and correcting bias associated with primer degeneracies and primer-template mismatches.
    Green SJ; Venkatramanan R; Naqib A
    PLoS One; 2015; 10(5):e0128122. PubMed ID: 25996930
    [TBL] [Abstract][Full Text] [Related]  

  • 3. PCR effects of melting temperature adjustment of individual primers in degenerate primer pools.
    Naqib A; Jeon T; Kunstman K; Wang W; Shen Y; Sweeney D; Hyde M; Green SJ
    PeerJ; 2019; 7():e6570. PubMed ID: 30863685
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The Use of Degenerate Primers in qPCR Analysis of Functional Genes Can Cause Dramatic Quantification Bias as Revealed by Investigation of nifH Primer Performance.
    Gaby JC; Buckley DH
    Microb Ecol; 2017 Oct; 74(3):701-708. PubMed ID: 28389727
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Effect of primer mismatch, annealing temperature and PCR cycle number on 16S rRNA gene-targetting bacterial community analysis.
    Sipos R; Székely AJ; Palatinszky M; Révész S; Márialigeti K; Nikolausz M
    FEMS Microbiol Ecol; 2007 May; 60(2):341-50. PubMed ID: 17343679
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Enzymological description of multitemplate PCR-Shrinking amplification bias by optimizing the polymerase-template ratio.
    Ingr M; Dostál J; Majerová T
    J Theor Biol; 2015 Oct; 382():178-86. PubMed ID: 26164060
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Automated degenerate PCR primer design for high-throughput sequencing improves efficiency of viral sequencing.
    Li K; Shrivastava S; Brownley A; Katzel D; Bera J; Nguyen AT; Thovarai V; Halpin R; Stockwell TB
    Virol J; 2012 Nov; 9():261. PubMed ID: 23131097
    [TBL] [Abstract][Full Text] [Related]  

  • 8. A low degenerate primer pool improved the efficiency of high-efficiency thermal asymmetric interlaced PCR to amplify T-DNA flanking sequences in
    Zhang H; Xu W; Feng Z; Hong Z
    3 Biotech; 2018 Jan; 8(1):14. PubMed ID: 29259889
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Primer ID Validates Template Sampling Depth and Greatly Reduces the Error Rate of Next-Generation Sequencing of HIV-1 Genomic RNA Populations.
    Zhou S; Jones C; Mieczkowski P; Swanstrom R
    J Virol; 2015 Aug; 89(16):8540-55. PubMed ID: 26041299
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Hemi-nested touchdown PCR combined with primer-template mismatch PCR for rapid isolation and sequencing of low molecular weight glutenin subunit gene family from a hexaploid wheat BAC library.
    Huang XQ; Cloutier S
    BMC Genet; 2007 May; 8():18. PubMed ID: 17480230
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Assessing alternative base substitutions at primer CpG sites to optimise unbiased PCR amplification of methylated sequences.
    Candiloro ILM; Mikeska T; Dobrovic A
    Clin Epigenetics; 2017; 9():31. PubMed ID: 28392841
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Metagenome complexity and template length are the main causes of bias in PCR-based bacteria community analysis.
    Peng W; Li X; Wang C; Cao H; Cui Z
    J Basic Microbiol; 2018 Nov; 58(11):987-997. PubMed ID: 30091475
    [TBL] [Abstract][Full Text] [Related]  

  • 13. [Polymerase chain reaction, cold probes and clinical diagnosis].
    Haras D; Amoros JP
    Sante; 1994; 4(1):43-52. PubMed ID: 7909267
    [TBL] [Abstract][Full Text] [Related]  

  • 14. In silico design and validation of a highly degenerate primer pair: a systematic approach.
    Chukwuemeka PO; Umar HI; Olukunle OF; Oretade OM; Olowosoke CB; Akinsola EO; Elabiyi MO; Kurmi UG; Eigbe JO; Oyelere BR; Isunu LE; Oretade OJ
    J Genet Eng Biotechnol; 2020 Nov; 18(1):72. PubMed ID: 33205353
    [TBL] [Abstract][Full Text] [Related]  

  • 15. RNA: a method to specifically inhibit PCR amplification of known members of a multigene family by degenerate primers.
    Yuen PS; Brooks KM; Li Y
    Nucleic Acids Res; 2001 Mar; 29(6):E31. PubMed ID: 11239008
    [TBL] [Abstract][Full Text] [Related]  

  • 16. An improved protocol with a highly degenerate primer targeting copper-containing membrane-bound monooxygenase genes for community analysis of methane- and ammonia-oxidizing bacteria.
    Wang JG; Xia F; Zeleke J; Zou B; Rhee SK; Quan ZX
    FEMS Microbiol Ecol; 2017 Mar; 93(3):. PubMed ID: 27940646
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Design of degenerate primers for multiplex nested-PCR detection of human lymphotropic herpesviruses.
    Nopponpunth V; Changrad S; Rakyuu A; Nertsawange J; Chansupit W; Poovorawan Y
    Southeast Asian J Trop Med Public Health; 2003 Mar; 34(1):120-5. PubMed ID: 12971524
    [TBL] [Abstract][Full Text] [Related]  

  • 18. A novel metric to improve mismatched primer selection and quantification accuracy in amplifying DNA repeats for quantitative polymerase chain reactions.
    Xu EY; Schneper LM; Notterman DA
    PLoS One; 2023; 18(10):e0292559. PubMed ID: 37812635
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Cycle sequencing using degenerate primers containing inosines.
    Shen Z; Liu J; Wells RL; Elkind MM
    Biotechniques; 1993 Jul; 15(1):82-4, 88-9. PubMed ID: 8363842
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Optimizing a PCR protocol for cpn60-based microbiome profiling of samples variously contaminated with host genomic DNA.
    Johnson LA; Chaban B; Harding JC; Hill JE
    BMC Res Notes; 2015 Jun; 8():253. PubMed ID: 26092180
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 8.