BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

204 related articles for article (PubMed ID: 31237421)

  • 1. Single-Cell RNA-seq: Introduction to Bioinformatics Analysis.
    Ji F; Sadreyev RI
    Curr Protoc Mol Biol; 2019 Jun; 127(1):e92. PubMed ID: 31237421
    [TBL] [Abstract][Full Text] [Related]  

  • 2. RNA-seq: Basic Bioinformatics Analysis.
    Ji F; Sadreyev RI
    Curr Protoc Mol Biol; 2018 Oct; 124(1):e68. PubMed ID: 30222249
    [TBL] [Abstract][Full Text] [Related]  

  • 3. SPARTA: Simple Program for Automated reference-based bacterial RNA-seq Transcriptome Analysis.
    Johnson BK; Scholz MB; Teal TK; Abramovitch RB
    BMC Bioinformatics; 2016 Feb; 17():66. PubMed ID: 26847232
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Dissecting Cellular Heterogeneity Using Single-Cell RNA Sequencing.
    Choi YH; Kim JK
    Mol Cells; 2019 Mar; 42(3):189-199. PubMed ID: 30764602
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Data Analysis in Single-Cell Transcriptome Sequencing.
    Gao S
    Methods Mol Biol; 2018; 1754():311-326. PubMed ID: 29536451
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Introduction to Single-Cell RNA Sequencing.
    Olsen TK; Baryawno N
    Curr Protoc Mol Biol; 2018 Apr; 122(1):e57. PubMed ID: 29851283
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Dissecting the human immune system with single cell RNA sequencing technology.
    Xu G; Liu Y; Li H; Liu L; Zhang S; Zhang Z
    J Leukoc Biol; 2020 Apr; 107(4):613-623. PubMed ID: 31803960
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Protocol for executing and benchmarking eight computational doublet-detection methods in single-cell RNA sequencing data analysis.
    Xi NM; Li JJ
    STAR Protoc; 2021 Sep; 2(3):100699. PubMed ID: 34382023
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Comparative Analysis of Droplet-Based Ultra-High-Throughput Single-Cell RNA-Seq Systems.
    Zhang X; Li T; Liu F; Chen Y; Yao J; Li Z; Huang Y; Wang J
    Mol Cell; 2019 Jan; 73(1):130-142.e5. PubMed ID: 30472192
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Pseudotime Reconstruction Using TSCAN.
    Ji Z; Ji H
    Methods Mol Biol; 2019; 1935():115-124. PubMed ID: 30758823
    [TBL] [Abstract][Full Text] [Related]  

  • 11. A Guide for Designing and Analyzing RNA-Seq Data.
    Chatterjee A; Ahn A; Rodger EJ; Stockwell PA; Eccles MR
    Methods Mol Biol; 2018; 1783():35-80. PubMed ID: 29767357
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Single-cell RNA sequencing technologies and bioinformatics pipelines.
    Hwang B; Lee JH; Bang D
    Exp Mol Med; 2018 Aug; 50(8):1-14. PubMed ID: 30089861
    [TBL] [Abstract][Full Text] [Related]  

  • 13. Studying Cancer Heterogeneity by Single-Cell RNA Sequencing.
    Bagnoli JW; Wange LE; Janjic A; Enard W
    Methods Mol Biol; 2019; 1956():305-319. PubMed ID: 30779041
    [TBL] [Abstract][Full Text] [Related]  

  • 14. GranatumX: A Community-engaging, Modularized, and Flexible Webtool for Single-cell Data Analysis.
    Garmire DG; Zhu X; Mantravadi A; Huang Q; Yunits B; Liu Y; Wolfgruber T; Poirion O; Zhao T; Arisdakessian C; Stanojevic S; Garmire LX
    Genomics Proteomics Bioinformatics; 2021 Jun; 19(3):452-460. PubMed ID: 34973417
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Normalization and noise reduction for single cell RNA-seq experiments.
    Ding B; Zheng L; Zhu Y; Li N; Jia H; Ai R; Wildberg A; Wang W
    Bioinformatics; 2015 Jul; 31(13):2225-7. PubMed ID: 25717193
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Falco: a quick and flexible single-cell RNA-seq processing framework on the cloud.
    Yang A; Troup M; Lin P; Ho JW
    Bioinformatics; 2017 Mar; 33(5):767-769. PubMed ID: 28025200
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Computational Analysis of Single-Cell RNA-Seq Data.
    Hwang B
    Methods Mol Biol; 2023; 2594():165-172. PubMed ID: 36264495
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Visualization and analysis of single-cell RNA-seq data by kernel-based similarity learning.
    Wang B; Zhu J; Pierson E; Ramazzotti D; Batzoglou S
    Nat Methods; 2017 Apr; 14(4):414-416. PubMed ID: 28263960
    [TBL] [Abstract][Full Text] [Related]  

  • 19. A practical guide to single-cell RNA-sequencing for biomedical research and clinical applications.
    Haque A; Engel J; Teichmann SA; Lönnberg T
    Genome Med; 2017 Aug; 9(1):75. PubMed ID: 28821273
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Tutorial: guidelines for the computational analysis of single-cell RNA sequencing data.
    Andrews TS; Kiselev VY; McCarthy D; Hemberg M
    Nat Protoc; 2021 Jan; 16(1):1-9. PubMed ID: 33288955
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 11.