BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

457 related articles for article (PubMed ID: 31241933)

  • 21. Structural characterization of an intrinsically disordered protein complex using integrated small-angle neutron scattering and computing.
    Chen SH; Weiss KL; Stanley C; Bhowmik D
    Protein Sci; 2023 Oct; 32(10):e4772. PubMed ID: 37646172
    [TBL] [Abstract][Full Text] [Related]  

  • 22. Refining All-Atom Protein Force Fields for Polar-Rich, Prion-like, Low-Complexity Intrinsically Disordered Proteins.
    Tang WS; Fawzi NL; Mittal J
    J Phys Chem B; 2020 Oct; 124(43):9505-9512. PubMed ID: 33078950
    [TBL] [Abstract][Full Text] [Related]  

  • 23. Structural Ensembles of Intrinsically Disordered Proteins Depend Strongly on Force Field: A Comparison to Experiment.
    Rauscher S; Gapsys V; Gajda MJ; Zweckstetter M; de Groot BL; Grubmüller H
    J Chem Theory Comput; 2015 Nov; 11(11):5513-24. PubMed ID: 26574339
    [TBL] [Abstract][Full Text] [Related]  

  • 24. General Purpose Water Model Can Improve Atomistic Simulations of Intrinsically Disordered Proteins.
    Shabane PS; Izadi S; Onufriev AV
    J Chem Theory Comput; 2019 Apr; 15(4):2620-2634. PubMed ID: 30865832
    [TBL] [Abstract][Full Text] [Related]  

  • 25. A Coarse-Grained Molecular Dynamics Approach to the Study of the Intrinsically Disordered Protein α-Synuclein.
    Ramis R; Ortega-Castro J; Casasnovas R; Mariño L; Vilanova B; Adrover M; Frau J
    J Chem Inf Model; 2019 Apr; 59(4):1458-1471. PubMed ID: 30933517
    [TBL] [Abstract][Full Text] [Related]  

  • 26. Characterization of the structural ensembles of p53 TAD2 by molecular dynamics simulations with different force fields.
    Ouyang Y; Zhao L; Zhang Z
    Phys Chem Chem Phys; 2018 Mar; 20(13):8676-8684. PubMed ID: 29537020
    [TBL] [Abstract][Full Text] [Related]  

  • 27. Recent Advances in Computational Protocols Addressing Intrinsically Disordered Proteins.
    Bhattacharya S; Lin X
    Biomolecules; 2019 Apr; 9(4):. PubMed ID: 30979035
    [TBL] [Abstract][Full Text] [Related]  

  • 28. Quality of force fields and sampling methods in simulating pepX peptides: a case study for intrinsically disordered proteins.
    Wang A; Peng X; Li Y; Zhang D; Zhang Z; Li G
    Phys Chem Chem Phys; 2021 Jan; 23(3):2430-2437. PubMed ID: 33459730
    [TBL] [Abstract][Full Text] [Related]  

  • 29. Comparison and Evaluation of Force Fields for Intrinsically Disordered Proteins.
    Rahman MU; Rehman AU; Liu H; Chen HF
    J Chem Inf Model; 2020 Oct; 60(10):4912-4923. PubMed ID: 32816485
    [TBL] [Abstract][Full Text] [Related]  

  • 30. Targeting Intrinsically Disordered Proteins through Dynamic Interactions.
    Chen J; Liu X; Chen J
    Biomolecules; 2020 May; 10(5):. PubMed ID: 32403216
    [TBL] [Abstract][Full Text] [Related]  

  • 31. Modulation of p53 N-terminal transactivation domain 2 conformation ensemble and kinetics by phosphorylation.
    Zhao L; Ouyang Y; Li Q; Zhang Z
    J Biomol Struct Dyn; 2020 Jun; 38(9):2613-2623. PubMed ID: 31248328
    [TBL] [Abstract][Full Text] [Related]  

  • 32. Evaluation of the Coupled Two-Dimensional Main Chain Torsional Potential in Modeling Intrinsically Disordered Proteins.
    Gao Y; Zhang C; Zhang JZ; Mei Y
    J Chem Inf Model; 2017 Feb; 57(2):267-274. PubMed ID: 28095698
    [TBL] [Abstract][Full Text] [Related]  

  • 33. Developing a molecular dynamics force field for both folded and disordered protein states.
    Robustelli P; Piana S; Shaw DE
    Proc Natl Acad Sci U S A; 2018 May; 115(21):E4758-E4766. PubMed ID: 29735687
    [TBL] [Abstract][Full Text] [Related]  

  • 34. Structural Characterization of N-WASP Domain V Using MD Simulations with NMR and SAXS Data.
    Chan-Yao-Chong M; Deville C; Pinet L; van Heijenoort C; Durand D; Ha-Duong T
    Biophys J; 2019 Apr; 116(7):1216-1227. PubMed ID: 30878202
    [TBL] [Abstract][Full Text] [Related]  

  • 35. Multiscale ensemble modeling of intrinsically disordered proteins: p53 N-terminal domain.
    Terakawa T; Takada S
    Biophys J; 2011 Sep; 101(6):1450-8. PubMed ID: 21943426
    [TBL] [Abstract][Full Text] [Related]  

  • 36. Computer Simulations of Intrinsically Disordered Proteins.
    Chong SH; Chatterjee P; Ham S
    Annu Rev Phys Chem; 2017 May; 68():117-134. PubMed ID: 28226222
    [TBL] [Abstract][Full Text] [Related]  

  • 37. Residue-Specific Force Field Improving the Sample of Intrinsically Disordered Proteins and Folded Proteins.
    Yang S; Liu H; Zhang Y; Lu H; Chen H
    J Chem Inf Model; 2019 Nov; 59(11):4793-4805. PubMed ID: 31613621
    [TBL] [Abstract][Full Text] [Related]  

  • 38. Extensive tests and evaluation of the CHARMM36IDPSFF force field for intrinsically disordered proteins and folded proteins.
    Liu H; Song D; Zhang Y; Yang S; Luo R; Chen HF
    Phys Chem Chem Phys; 2019 Oct; 21(39):21918-21931. PubMed ID: 31552948
    [TBL] [Abstract][Full Text] [Related]  

  • 39. Higher Accuracy Achieved in the Simulations of Protein Structure Refinement, Protein Folding, and Intrinsically Disordered Proteins Using Polarizable Force Fields.
    Wang A; Zhang Z; Li G
    J Phys Chem Lett; 2018 Dec; 9(24):7110-7116. PubMed ID: 30514082
    [TBL] [Abstract][Full Text] [Related]  

  • 40. Structural ensemble of an intrinsically disordered polypeptide.
    Mittal J; Yoo TH; Georgiou G; Truskett TM
    J Phys Chem B; 2013 Jan; 117(1):118-24. PubMed ID: 23205890
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 23.