190 related articles for article (PubMed ID: 31250882)
1. Isoform function prediction based on bi-random walks on a heterogeneous network.
Yu G; Wang K; Domeniconi C; Guo M; Wang J
Bioinformatics; 2020 Jan; 36(1):303-310. PubMed ID: 31250882
[TBL] [Abstract][Full Text] [Related]
2. Differentiating isoform functions with collaborative matrix factorization.
Wang K; Wang J; Domeniconi C; Zhang X; Yu G
Bioinformatics; 2020 Mar; 36(6):1864-1871. PubMed ID: 32176770
[TBL] [Abstract][Full Text] [Related]
3. DMIL-IsoFun: predicting isoform function using deep multi-instance learning.
Yu G; Zhou G; Zhang X; Domeniconi C; Guo M
Bioinformatics; 2021 Dec; 37(24):4818-4825. PubMed ID: 34282449
[TBL] [Abstract][Full Text] [Related]
4. Tissue Specificity Based Isoform Function Prediction.
Yu G; Huang Q; Zhang X; Guo M; Wang J
IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(5):3048-3059. PubMed ID: 34185647
[TBL] [Abstract][Full Text] [Related]
5. Isoform function prediction by Gene Ontology embedding.
Qiu S; Yu G; Lu X; Domeniconi C; Guo M
Bioinformatics; 2022 Sep; 38(19):4581-4588. PubMed ID: 35997558
[TBL] [Abstract][Full Text] [Related]
6. NewGOA: Predicting New GO Annotations of Proteins by Bi-Random Walks on a Hybrid Graph.
Yu G; Fu G; Wang J; Zhao Y
IEEE/ACM Trans Comput Biol Bioinform; 2018; 15(4):1390-1402. PubMed ID: 28641268
[TBL] [Abstract][Full Text] [Related]
7. DeepIDA: Predicting Isoform-Disease Associations by Data Fusion and Deep Neural Networks.
Yu G; Yang Y; Yan Y; Guo M; Zhang X; Wang J
IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(4):2166-2176. PubMed ID: 33571094
[TBL] [Abstract][Full Text] [Related]
8. Cross-Species Protein Function Prediction with Asynchronous-Random Walk.
Zhao Y; Wang J; Guo M; Zhang X; Yu G
IEEE/ACM Trans Comput Biol Bioinform; 2021; 18(4):1439-1450. PubMed ID: 31562099
[TBL] [Abstract][Full Text] [Related]
9. ISOGO: Functional annotation of protein-coding splice variants.
Ferrer-Bonsoms JA; Cassol I; Fernández-Acín P; Castilla C; Carazo F; Rubio A
Sci Rep; 2020 Jan; 10(1):1069. PubMed ID: 31974522
[TBL] [Abstract][Full Text] [Related]
10. NoGOA: predicting noisy GO annotations using evidences and sparse representation.
Yu G; Lu C; Wang J
BMC Bioinformatics; 2017 Jul; 18(1):350. PubMed ID: 28732468
[TBL] [Abstract][Full Text] [Related]
11. Information theory applied to the sparse gene ontology annotation network to predict novel gene function.
Tao Y; Sam L; Li J; Friedman C; Lussier YA
Bioinformatics; 2007 Jul; 23(13):i529-38. PubMed ID: 17646340
[TBL] [Abstract][Full Text] [Related]
12. NMFGO: Gene Function Prediction via Nonnegative Matrix Factorization with Gene Ontology.
Yu G; Wang K; Fu G; Guo M; Wang J
IEEE/ACM Trans Comput Biol Bioinform; 2020; 17(1):238-249. PubMed ID: 30059316
[TBL] [Abstract][Full Text] [Related]
13. IsoDA: Isoform-Disease Association Prediction by Multiomics Data Fusion.
Huang Q; Wang J; Zhang X; Guo M; Yu G
J Comput Biol; 2021 Aug; 28(8):804-819. PubMed ID: 33826865
[TBL] [Abstract][Full Text] [Related]
14. DIFFUSE: predicting isoform functions from sequences and expression profiles via deep learning.
Chen H; Shaw D; Zeng J; Bu D; Jiang T
Bioinformatics; 2019 Jul; 35(14):i284-i294. PubMed ID: 31510699
[TBL] [Abstract][Full Text] [Related]
15. DeepIII: Predicting Isoform-Isoform Interactions by Deep Neural Networks and Data Fusion.
Wang J; Zhang L; Zeng A; Xia D; Yu J; Yu G
IEEE/ACM Trans Comput Biol Bioinform; 2022; 19(4):2177-2187. PubMed ID: 33764878
[TBL] [Abstract][Full Text] [Related]
16. Predicting functions of maize proteins using graph convolutional network.
Zhou G; Wang J; Zhang X; Guo M; Yu G
BMC Bioinformatics; 2020 Dec; 21(Suppl 16):420. PubMed ID: 33323113
[TBL] [Abstract][Full Text] [Related]
17. Systematically differentiating functions for alternatively spliced isoforms through integrating RNA-seq data.
Eksi R; Li HD; Menon R; Wen Y; Omenn GS; Kretzler M; Guan Y
PLoS Comput Biol; 2013; 9(11):e1003314. PubMed ID: 24244129
[TBL] [Abstract][Full Text] [Related]
18. Gene function prediction based on Gene Ontology Hierarchy Preserving Hashing.
Zhao Y; Fu G; Wang J; Guo M; Yu G
Genomics; 2019 May; 111(3):334-342. PubMed ID: 29477548
[TBL] [Abstract][Full Text] [Related]
19. A tensor-based bi-random walks model for protein function prediction.
Hu S; Zhang Z; Xiong H; Jiang M; Luo Y; Yan W; Zhao B
BMC Bioinformatics; 2022 May; 23(1):199. PubMed ID: 35637427
[TBL] [Abstract][Full Text] [Related]
20. Matrix factorization-based data fusion for the prediction of lncRNA-disease associations.
Fu G; Wang J; Domeniconi C; Yu G
Bioinformatics; 2018 May; 34(9):1529-1537. PubMed ID: 29228285
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]