These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.
4. Objective assessment of the evolutionary action equation for the fitness effect of missense mutations across CAGI-blinded contests. Katsonis P; Lichtarge O Hum Mutat; 2017 Sep; 38(9):1072-1084. PubMed ID: 28544059 [TBL] [Abstract][Full Text] [Related]
5. Performance of computational methods for the evaluation of pericentriolar material 1 missense variants in CAGI-5. Monzon AM; Carraro M; Chiricosta L; Reggiani F; Han J; Ozturk K; Wang Y; Miller M; Bromberg Y; Capriotti E; Savojardo C; Babbi G; Martelli PL; Casadio R; Katsonis P; Lichtarge O; Carter H; Kousi M; Katsanis N; Andreoletti G; Moult J; Brenner SE; Ferrari C; Leonardi E; Tosatto SCE Hum Mutat; 2019 Sep; 40(9):1474-1485. PubMed ID: 31260570 [TBL] [Abstract][Full Text] [Related]
6. What went wrong with variant effect predictor performance for the PCM1 challenge. Miller M; Wang Y; Bromberg Y Hum Mutat; 2019 Sep; 40(9):1486-1494. PubMed ID: 31268618 [TBL] [Abstract][Full Text] [Related]
7. Spectrum and Prevalence of CALM1-, CALM2-, and CALM3-Encoded Calmodulin Variants in Long QT Syndrome and Functional Characterization of a Novel Long QT Syndrome-Associated Calmodulin Missense Variant, E141G. Boczek NJ; Gomez-Hurtado N; Ye D; Calvert ML; Tester DJ; Kryshtal D; Hwang HS; Johnson CN; Chazin WJ; Loporcaro CG; Shah M; Papez AL; Lau YR; Kanter R; Knollmann BC; Ackerman MJ Circ Cardiovasc Genet; 2016 Apr; 9(2):136-146. PubMed ID: 26969752 [TBL] [Abstract][Full Text] [Related]
8. Curated multiple sequence alignment for the Adenomatous Polyposis Coli (APC) gene and accuracy of in silico pathogenicity predictions. Karabachev AD; Martini DJ; Hermel DJ; Solcz D; Richardson ME; Pesaran T; Sarkar IN; Greenblatt MS PLoS One; 2020; 15(8):e0233673. PubMed ID: 32750050 [TBL] [Abstract][Full Text] [Related]
9. CAGI5: Objective performance assessments of predictions based on the Evolutionary Action equation. Katsonis P; Lichtarge O Hum Mutat; 2019 Sep; 40(9):1436-1454. PubMed ID: 31317604 [TBL] [Abstract][Full Text] [Related]
10. Similarities and differences between yeast and vertebrate calmodulin: an examination of the calcium-binding and structural properties of calmodulin from the yeast Saccharomyces cerevisiae. Starovasnik MA; Davis TN; Klevit RE Biochemistry; 1993 Apr; 32(13):3261-70. PubMed ID: 8461293 [TBL] [Abstract][Full Text] [Related]
11. Specific conformation and Ca(2+)-binding mode of yeast calmodulin: insight into evolutionary development. Nakashima K; Ishida H; Nakatomi A; Yazawa M J Biochem; 2012 Jul; 152(1):27-35. PubMed ID: 22563102 [TBL] [Abstract][Full Text] [Related]
12. Exploring the use of molecular dynamics in assessing protein variants for phenotypic alterations. Garg A; Pal D Hum Mutat; 2019 Sep; 40(9):1424-1435. PubMed ID: 31106920 [TBL] [Abstract][Full Text] [Related]
13. Conformation and structural transitions in the EF-hands of calmodulin. Moorthy AK; Murthy MR J Biomol Struct Dyn; 2001 Aug; 19(1):47-57. PubMed ID: 11565851 [TBL] [Abstract][Full Text] [Related]
14. Assessment of predicted enzymatic activity of α-N-acetylglucosaminidase variants of unknown significance for CAGI 2016. Clark WT; Kasak L; Bakolitsa C; Hu Z; Andreoletti G; Babbi G; Bromberg Y; Casadio R; Dunbrack R; Folkman L; Ford CT; Jones D; Katsonis P; Kundu K; Lichtarge O; Martelli PL; Mooney SD; Nodzak C; Pal LR; Radivojac P; Savojardo C; Shi X; Zhou Y; Uppal A; Xu Q; Yin Y; Pejaver V; Wang M; Wei L; Moult J; Yu GK; Brenner SE; LeBowitz JH Hum Mutat; 2019 Sep; 40(9):1519-1529. PubMed ID: 31342580 [TBL] [Abstract][Full Text] [Related]
15. Functional interactions between the p35 subunit of the Arp2/3 complex and calmodulin in yeast. Schaerer-Brodbeck C; Riezman H Mol Biol Cell; 2000 Apr; 11(4):1113-27. PubMed ID: 10749918 [TBL] [Abstract][Full Text] [Related]
16. Reports from the fifth edition of CAGI: The Critical Assessment of Genome Interpretation. Andreoletti G; Pal LR; Moult J; Brenner SE Hum Mutat; 2019 Sep; 40(9):1197-1201. PubMed ID: 31334884 [TBL] [Abstract][Full Text] [Related]
17. Assessing predictions of the impact of variants on splicing in CAGI5. Mount SM; Avsec Ž; Carmel L; Casadio R; Çelik MH; Chen K; Cheng J; Cohen NE; Fairbrother WG; Fenesh T; Gagneur J; Gotea V; Holzer T; Lin CF; Martelli PL; Naito T; Nguyen TYD; Savojardo C; Unger R; Wang R; Yang Y; Zhao H Hum Mutat; 2019 Sep; 40(9):1215-1224. PubMed ID: 31301154 [TBL] [Abstract][Full Text] [Related]
18. BRCA1- and BRCA2-specific in silico tools for variant interpretation in the CAGI 5 ENIGMA challenge. Padilla N; Moles-Fernández A; Riera C; Montalban G; Özkan S; Ootes L; Bonache S; Díez O; Gutiérrez-Enríquez S; de la Cruz X Hum Mutat; 2019 Sep; 40(9):1593-1611. PubMed ID: 31112341 [TBL] [Abstract][Full Text] [Related]
19. Functional and genetic characterization of calmodulin from the dimorphic and pathogenic fungus Paracoccidioides brasiliensis. de Carvalho MJ; Amorim Jesuino RS; Daher BS; Silva-Pereira I; de Freitas SM; Soares CM; Felipe MS Fungal Genet Biol; 2003 Aug; 39(3):204-10. PubMed ID: 12892633 [TBL] [Abstract][Full Text] [Related]
20. Allosteric effects of the antipsychotic drug trifluoperazine on the energetics of calcium binding by calmodulin. Feldkamp MD; O'Donnell SE; Yu L; Shea MA Proteins; 2010 Aug; 78(10):2265-82. PubMed ID: 20544963 [TBL] [Abstract][Full Text] [Related] [Next] [New Search]