BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

195 related articles for article (PubMed ID: 31289831)

  • 41. The African Human Microbiome Portal: a public web portal of curated metagenomic metadata.
    Kiran A; Hanachi M; Alsayed N; Fassatoui M; Oduaran OH; Allali I; Maslamoney S; Meintjes A; Zass L; Rocha JD; Kefi R; Benkahla A; Ghedira K; Panji S; Mulder N; Fadlelmola FM; Souiai O
    Database (Oxford); 2024 Jan; 2024():. PubMed ID: 38204360
    [TBL] [Abstract][Full Text] [Related]  

  • 42. SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis.
    Volant S; Lechat P; Woringer P; Motreff L; Campagne P; Malabat C; Kennedy S; Ghozlane A
    BMC Bioinformatics; 2020 Aug; 21(1):345. PubMed ID: 32778056
    [TBL] [Abstract][Full Text] [Related]  

  • 43. CoCoNet: an efficient deep learning tool for viral metagenome binning.
    Arisdakessian CG; Nigro OD; Steward GF; Poisson G; Belcaid M
    Bioinformatics; 2021 Sep; 37(18):2803-2810. PubMed ID: 33822891
    [TBL] [Abstract][Full Text] [Related]  

  • 44. ViroProfiler: a containerized bioinformatics pipeline for viral metagenomic data analysis.
    Ru J; Khan Mirzaei M; Xue J; Peng X; Deng L
    Gut Microbes; 2023; 15(1):2192522. PubMed ID: 36998174
    [TBL] [Abstract][Full Text] [Related]  

  • 45. NCBI's Virus Discovery Hackathon: Engaging Research Communities to Identify Cloud Infrastructure Requirements.
    Connor R; Brister R; Buchmann JP; Deboutte W; Edwards R; Martí-Carreras J; Tisza M; Zalunin V; Andrade-Martínez J; Cantu A; D'Amour M; Efremov A; Fleischmann L; Forero-Junco L; Garmaeva S; Giluso M; Glickman C; Henderson M; Kellman B; Kristensen D; Leubsdorf C; Levi K; Levi S; Pakala S; Peddu V; Ponsero A; Ribeiro E; Roy F; Rutter L; Saha S; Shakya M; Shean R; Miller M; Tully B; Turkington C; Youens-Clark K; Vanmechelen B; Busby B
    Genes (Basel); 2019 Sep; 10(9):. PubMed ID: 31527408
    [TBL] [Abstract][Full Text] [Related]  

  • 46. COMAN: a web server for comprehensive metatranscriptomics analysis.
    Ni Y; Li J; Panagiotou G
    BMC Genomics; 2016 Aug; 17(1):622. PubMed ID: 27515514
    [TBL] [Abstract][Full Text] [Related]  

  • 47. MDITRE: Scalable and Interpretable Machine Learning for Predicting Host Status from Temporal Microbiome Dynamics.
    Maringanti VS; Bucci V; Gerber GK
    mSystems; 2022 Oct; 7(5):e0013222. PubMed ID: 36069455
    [TBL] [Abstract][Full Text] [Related]  

  • 48. A Massively Parallel Sequence Similarity Search for Metagenomic Sequencing Data.
    Kakuta M; Suzuki S; Izawa K; Ishida T; Akiyama Y
    Int J Mol Sci; 2017 Oct; 18(10):. PubMed ID: 29019934
    [TBL] [Abstract][Full Text] [Related]  

  • 49. QIIME 2 Enables Comprehensive End-to-End Analysis of Diverse Microbiome Data and Comparative Studies with Publicly Available Data.
    Estaki M; Jiang L; Bokulich NA; McDonald D; González A; Kosciolek T; Martino C; Zhu Q; Birmingham A; Vázquez-Baeza Y; Dillon MR; Bolyen E; Caporaso JG; Knight R
    Curr Protoc Bioinformatics; 2020 Jun; 70(1):e100. PubMed ID: 32343490
    [TBL] [Abstract][Full Text] [Related]  

  • 50. A practical guide to amplicon and metagenomic analysis of microbiome data.
    Liu YX; Qin Y; Chen T; Lu M; Qian X; Guo X; Bai Y
    Protein Cell; 2021 May; 12(5):315-330. PubMed ID: 32394199
    [TBL] [Abstract][Full Text] [Related]  

  • 51. Ontology-Enriched Specifications Enabling Findable, Accessible, Interoperable, and Reusable Marine Metagenomic Datasets in Cyberinfrastructure Systems.
    Blumberg KL; Ponsero AJ; Bomhoff M; Wood-Charlson EM; DeLong EF; Hurwitz BL
    Front Microbiol; 2021; 12():765268. PubMed ID: 34956127
    [TBL] [Abstract][Full Text] [Related]  

  • 52. MoveApps: a serverless no-code analysis platform for animal tracking data.
    Kölzsch A; Davidson SC; Gauggel D; Hahn C; Hirt J; Kays R; Lang I; Lohr A; Russell B; Scharf AK; Schneider G; Vinciguerra CM; Wikelski M; Safi K
    Mov Ecol; 2022 Jul; 10(1):30. PubMed ID: 35843990
    [TBL] [Abstract][Full Text] [Related]  

  • 53. Review of the Current State of Freely Accessible Web Tools for the Analysis of 16S rRNA Sequencing of the Gut Microbiome.
    Ibal JC; Park YJ; Park MK; Lee J; Kim MC; Shin JH
    Int J Mol Sci; 2022 Sep; 23(18):. PubMed ID: 36142775
    [TBL] [Abstract][Full Text] [Related]  

  • 54. Piphillin: Improved Prediction of Metagenomic Content by Direct Inference from Human Microbiomes.
    Iwai S; Weinmaier T; Schmidt BL; Albertson DG; Poloso NJ; Dabbagh K; DeSantis TZ
    PLoS One; 2016; 11(11):e0166104. PubMed ID: 27820856
    [TBL] [Abstract][Full Text] [Related]  

  • 55. clubber: removing the bioinformatics bottleneck in big data analyses.
    Miller M; Zhu C; Bromberg Y
    J Integr Bioinform; 2017 Jun; 14(2):. PubMed ID: 28609295
    [TBL] [Abstract][Full Text] [Related]  

  • 56. Offline Next Generation Metagenomics Sequence Analysis Using MinION Detection Software (MINDS).
    Deshpande SV; Reed TM; Sullivan RF; Kerkhof LJ; Beigel KM; Wade MM
    Genes (Basel); 2019 Jul; 10(8):. PubMed ID: 31366182
    [TBL] [Abstract][Full Text] [Related]  

  • 57. SKIOME Project: a curated collection of skin microbiome datasets enriched with study-related metadata.
    Agostinetto G; Bozzi D; Porro D; Casiraghi M; Labra M; Bruno A
    Database (Oxford); 2022 May; 2022():. PubMed ID: 35576001
    [TBL] [Abstract][Full Text] [Related]  

  • 58. FARAO: the flexible all-round annotation organizer.
    Hammarén R; Pal C; Bengtsson-Palme J
    Bioinformatics; 2016 Dec; 32(23):3664-3666. PubMed ID: 27493193
    [TBL] [Abstract][Full Text] [Related]  

  • 59. ICoVeR - an interactive visualization tool for verification and refinement of metagenomic bins.
    Broeksema B; Calusinska M; McGee F; Winter K; Bongiovanni F; Goux X; Wilmes P; Delfosse P; Ghoniem M
    BMC Bioinformatics; 2017 May; 18(1):233. PubMed ID: 28464793
    [TBL] [Abstract][Full Text] [Related]  

  • 60. Ontology-driven analysis of marine metagenomics: what more can we learn from our data?
    Blumberg K; Miller M; Ponsero A; Hurwitz B
    Gigascience; 2022 Dec; 12():. PubMed ID: 37941395
    [TBL] [Abstract][Full Text] [Related]  

    [Previous]   [Next]    [New Search]
    of 10.