These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

163 related articles for article (PubMed ID: 31297843)

  • 1. Protein Topology Prediction Algorithms Systematically Investigated in the Yeast Saccharomyces cerevisiae.
    Weill U; Cohen N; Fadel A; Ben-Dor S; Schuldiner M
    Bioessays; 2019 Aug; 41(8):e1800252. PubMed ID: 31297843
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Topology models for 37 Saccharomyces cerevisiae membrane proteins based on C-terminal reporter fusions and predictions.
    Kim H; Melén K; von Heijne G
    J Biol Chem; 2003 Mar; 278(12):10208-13. PubMed ID: 12524434
    [TBL] [Abstract][Full Text] [Related]  

  • 3. A global topology map of the Saccharomyces cerevisiae membrane proteome.
    Kim H; Melén K; Osterberg M; von Heijne G
    Proc Natl Acad Sci U S A; 2006 Jul; 103(30):11142-7. PubMed ID: 16847258
    [TBL] [Abstract][Full Text] [Related]  

  • 4. The human transmembrane proteome.
    Dobson L; Reményi I; Tusnády GE
    Biol Direct; 2015 May; 10():31. PubMed ID: 26018427
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Membrane topology of the yeast endoplasmic reticulum-localized ubiquitin ligase Doa10 and comparison with its human ortholog TEB4 (MARCH-VI).
    Kreft SG; Wang L; Hochstrasser M
    J Biol Chem; 2006 Feb; 281(8):4646-53. PubMed ID: 16373356
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology.
    Malmström L; Riffle M; Strauss CE; Chivian D; Davis TN; Bonneau R; Baker D
    PLoS Biol; 2007 Apr; 5(4):e76. PubMed ID: 17373854
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Reliability measures for membrane protein topology prediction algorithms.
    Melén K; Krogh A; von Heijne G
    J Mol Biol; 2003 Mar; 327(3):735-44. PubMed ID: 12634065
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Short transmembrane domains with high-volume exoplasmic halves determine retention of Type II membrane proteins in the Golgi complex.
    Quiroga R; Trenchi A; González Montoro A; Valdez Taubas J; Maccioni HJ
    J Cell Sci; 2013 Dec; 126(Pt 23):5344-9. PubMed ID: 24105265
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Improved membrane protein topology prediction by domain assignments.
    Bernsel A; Von Heijne G
    Protein Sci; 2005 Jul; 14(7):1723-8. PubMed ID: 15987901
    [TBL] [Abstract][Full Text] [Related]  

  • 10. LoQAtE--Localization and Quantitation ATlas of the yeast proteomE. A new tool for multiparametric dissection of single-protein behavior in response to biological perturbations in yeast.
    Breker M; Gymrek M; Moldavski O; Schuldiner M
    Nucleic Acids Res; 2014 Jan; 42(Database issue):D726-30. PubMed ID: 24150937
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Enhancing membrane protein subcellular localization prediction by parallel fusion of multi-view features.
    Yu D; Wu X; Shen H; Yang J; Tang Z; Qi Y; Yang J
    IEEE Trans Nanobioscience; 2012 Dec; 11(4):375-85. PubMed ID: 22875262
    [TBL] [Abstract][Full Text] [Related]  

  • 12. Refined topology model of the STT3/Stt3 protein subunit of the oligosaccharyltransferase complex.
    Lara P; Öjemalm K; Reithinger J; Holgado A; Maojun Y; Hammed A; Mattle D; Kim H; Nilsson I
    J Biol Chem; 2017 Jul; 292(27):11349-11360. PubMed ID: 28512128
    [TBL] [Abstract][Full Text] [Related]  

  • 13. AVID: an integrative framework for discovering functional relationships among proteins.
    Jiang T; Keating AE
    BMC Bioinformatics; 2005 Jun; 6():136. PubMed ID: 15929793
    [TBL] [Abstract][Full Text] [Related]  

  • 14. The interaction map of yeast: terra incognita?
    Mellor J; DeLisi C
    J Biol; 2006; 5(4):10. PubMed ID: 16762048
    [TBL] [Abstract][Full Text] [Related]  

  • 15. Membrane topology of the Alg14 endoplasmic reticulum UDP-GlcNAc transferase subunit.
    Averbeck N; Keppler-Ross S; Dean N
    J Biol Chem; 2007 Oct; 282(40):29081-8. PubMed ID: 17686769
    [TBL] [Abstract][Full Text] [Related]  

  • 16. HMMpTM: improving transmembrane protein topology prediction using phosphorylation and glycosylation site prediction.
    Tsaousis GN; Bagos PG; Hamodrakas SJ
    Biochim Biophys Acta; 2014 Feb; 1844(2):316-22. PubMed ID: 24225132
    [TBL] [Abstract][Full Text] [Related]  

  • 17. The shape of the transmembrane domain is a novel endocytosis signal for single-spanning membrane proteins.
    González Montoro A; Bigliani G; Valdez Taubas J
    J Cell Sci; 2017 Nov; 130(22):3829-3838. PubMed ID: 28972131
    [TBL] [Abstract][Full Text] [Related]  

  • 18. Determination of the membrane topology of Arv1 and the requirement of the ER luminal region for Arv1 function in Saccharomyces cerevisiae.
    Villasmil ML; Nickels JT
    FEMS Yeast Res; 2011 Sep; 11(6):524-7. PubMed ID: 21539707
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Genetic and biochemical evaluation of eucaryotic membrane protein topology: multiple transmembrane domains of Saccharomyces cerevisiae 3-hydroxy-3-methylglutaryl coenzyme A reductase.
    Sengstag C; Stirling C; Schekman R; Rine J
    Mol Cell Biol; 1990 Feb; 10(2):672-80. PubMed ID: 2405252
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Transmembrane domain-dependent sorting of proteins to the ER and plasma membrane in yeast.
    Rayner JC; Pelham HR
    EMBO J; 1997 Apr; 16(8):1832-41. PubMed ID: 9155009
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 9.