269 related articles for article (PubMed ID: 31307500)
1. The bread wheat epigenomic map reveals distinct chromatin architectural and evolutionary features of functional genetic elements.
Li Z; Wang M; Lin K; Xie Y; Guo J; Ye L; Zhuang Y; Teng W; Ran X; Tong Y; Xue Y; Zhang W; Zhang Y
Genome Biol; 2019 Jul; 20(1):139. PubMed ID: 31307500
[TBL] [Abstract][Full Text] [Related]
2. Open chromatin interaction maps reveal functional regulatory elements and chromatin architecture variations during wheat evolution.
Yuan J; Sun H; Wang Y; Li L; Chen S; Jiao W; Jia G; Wang L; Mao J; Ni Z; Wang X; Song Q
Genome Biol; 2022 Jan; 23(1):34. PubMed ID: 35073966
[TBL] [Abstract][Full Text] [Related]
3. Understanding DNA Methylation Patterns in Wheat.
Gardiner LJ
Methods Mol Biol; 2020; 2093():33-46. PubMed ID: 32088887
[TBL] [Abstract][Full Text] [Related]
4. ChARM: Discovery of combinatorial chromatin modification patterns in hepatitis B virus X-transformed mouse liver cancer using association rule mining.
Park SH; Lee SM; Kim YJ; Kim S
BMC Bioinformatics; 2016 Dec; 17(Suppl 16):452. PubMed ID: 28105934
[TBL] [Abstract][Full Text] [Related]
5. Epigenomic landscape of enhancer elements during Hydra head organizer formation.
Reddy PC; Gungi A; Ubhe S; Galande S
Epigenetics Chromatin; 2020 Oct; 13(1):43. PubMed ID: 33046126
[TBL] [Abstract][Full Text] [Related]
6. Integrating epigenomic data and 3D genomic structure with a new measure of chromatin assortativity.
Pancaldi V; Carrillo-de-Santa-Pau E; Javierre BM; Juan D; Fraser P; Spivakov M; Valencia A; Rico D
Genome Biol; 2016 Jul; 17(1):152. PubMed ID: 27391817
[TBL] [Abstract][Full Text] [Related]
7. An atlas of wheat epigenetic regulatory elements reveals subgenome divergence in the regulation of development and stress responses.
Wang M; Li Z; Zhang Y; Zhang Y; Xie Y; Ye L; Zhuang Y; Lin K; Zhao F; Guo J; Teng W; Zhang W; Tong Y; Xue Y; Zhang Y
Plant Cell; 2021 May; 33(4):865-881. PubMed ID: 33594406
[TBL] [Abstract][Full Text] [Related]
8. Enhancer transcription detected in the nascent transcriptomic landscape of bread wheat.
Xie Y; Chen Y; Li Z; Zhu J; Liu M; Zhang Y; Dong Z
Genome Biol; 2022 Apr; 23(1):109. PubMed ID: 35501845
[TBL] [Abstract][Full Text] [Related]
9. Optimization of ATAC-seq in wheat seedling roots using INTACT-isolated nuclei.
Debernardi JM; Burguener G; Bubb K; Liu Q; Queitsch C; Dubcovsky J
BMC Plant Biol; 2023 May; 23(1):270. PubMed ID: 37211599
[TBL] [Abstract][Full Text] [Related]
10. Integrative analysis of reference epigenomes in 20 rice varieties.
Zhao L; Xie L; Zhang Q; Ouyang W; Deng L; Guan P; Ma M; Li Y; Zhang Y; Xiao Q; Zhang J; Li H; Wang S; Man J; Cao Z; Zhang Q; Zhang Q; Li G; Li X
Nat Commun; 2020 May; 11(1):2658. PubMed ID: 32461553
[TBL] [Abstract][Full Text] [Related]
11. Comparative sequence analysis of the phytochrome C gene and its upstream region in allohexaploid wheat reveals new data on the evolution of its three constituent genomes.
Devos KM; Beales J; Ogihara Y; Doust AN
Plant Mol Biol; 2005 Jul; 58(5):625-41. PubMed ID: 16158239
[TBL] [Abstract][Full Text] [Related]
12. Comparative epigenomic annotation of regulatory DNA.
Xiao S; Xie D; Cao X; Yu P; Xing X; Chen CC; Musselman M; Xie M; West FD; Lewin HA; Wang T; Zhong S
Cell; 2012 Jun; 149(6):1381-92. PubMed ID: 22682255
[TBL] [Abstract][Full Text] [Related]
13. Genome-wide analysis of H3K4me3 and H3K27me3 modifications due to Lr28 for leaf rust resistance in bread wheat (Triticum aestivum).
Saripalli G; Singh K; Gautam T; Kumar S; Raghuvanshi S; Prasad P; Jain N; Sharma PK; Balyan HS; Gupta PK
Plant Mol Biol; 2020 Sep; 104(1-2):113-136. PubMed ID: 32627097
[TBL] [Abstract][Full Text] [Related]
14. A cis-regulatory map of the Drosophila genome.
Nègre N; Brown CD; Ma L; Bristow CA; Miller SW; Wagner U; Kheradpour P; Eaton ML; Loriaux P; Sealfon R; Li Z; Ishii H; Spokony RF; Chen J; Hwang L; Cheng C; Auburn RP; Davis MB; Domanus M; Shah PK; Morrison CA; Zieba J; Suchy S; Senderowicz L; Victorsen A; Bild NA; Grundstad AJ; Hanley D; MacAlpine DM; Mannervik M; Venken K; Bellen H; White R; Gerstein M; Russell S; Grossman RL; Ren B; Posakony JW; Kellis M; White KP
Nature; 2011 Mar; 471(7339):527-31. PubMed ID: 21430782
[TBL] [Abstract][Full Text] [Related]
15. Dynamic chromatin regulatory programs during embryogenesis of hexaploid wheat.
Zhao L; Yang Y; Chen J; Lin X; Zhang H; Wang H; Wang H; Bie X; Jiang J; Feng X; Fu X; Zhang X; Du Z; Xiao J
Genome Biol; 2023 Jan; 24(1):7. PubMed ID: 36639687
[TBL] [Abstract][Full Text] [Related]
16. Characterizing cis-regulatory elements using single-cell epigenomics.
Preissl S; Gaulton KJ; Ren B
Nat Rev Genet; 2023 Jan; 24(1):21-43. PubMed ID: 35840754
[TBL] [Abstract][Full Text] [Related]
17. Epigenomics in stress tolerance of plants under the climate change.
Kumar M; Rani K
Mol Biol Rep; 2023 Jul; 50(7):6201-6216. PubMed ID: 37294468
[TBL] [Abstract][Full Text] [Related]
18. H3K4me3, H3K9ac, H3K27ac, H3K27me3 and H3K9me3 Histone Tags Suggest Distinct Regulatory Evolution of Open and Condensed Chromatin Landmarks.
Igolkina AA; Zinkevich A; Karandasheva KO; Popov AA; Selifanova MV; Nikolaeva D; Tkachev V; Penzar D; Nikitin DM; Buzdin A
Cells; 2019 Sep; 8(9):. PubMed ID: 31491936
[TBL] [Abstract][Full Text] [Related]
19. H3K9 and H3K14 acetylation co-occur at many gene regulatory elements, while H3K14ac marks a subset of inactive inducible promoters in mouse embryonic stem cells.
Karmodiya K; Krebs AR; Oulad-Abdelghani M; Kimura H; Tora L
BMC Genomics; 2012 Aug; 13():424. PubMed ID: 22920947
[TBL] [Abstract][Full Text] [Related]
20. Relationship between homoeologous regulatory and structural genes in allopolyploid genome - a case study in bread wheat.
Khlestkina EK; Röder MS; Salina EA
BMC Plant Biol; 2008 Aug; 8():88. PubMed ID: 18700978
[TBL] [Abstract][Full Text] [Related]
[Next] [New Search]
