These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


BIOMARKERS

Molecular Biopsy of Human Tumors

- a resource for Precision Medicine *

223 related articles for article (PubMed ID: 31316107)

  • 1. Systematic evaluation of library preparation methods and sequencing platforms for high-throughput whole genome bisulfite sequencing.
    Zhou L; Ng HK; Drautz-Moses DI; Schuster SC; Beck S; Kim C; Chambers JC; Loh M
    Sci Rep; 2019 Jul; 9(1):10383. PubMed ID: 31316107
    [TBL] [Abstract][Full Text] [Related]  

  • 2. Guidelines for whole genome bisulphite sequencing of intact and FFPET DNA on the Illumina HiSeq X Ten.
    Nair SS; Luu PL; Qu W; Maddugoda M; Huschtscha L; Reddel R; Chenevix-Trench G; Toso M; Kench JG; Horvath LG; Hayes VM; Stricker PD; Hughes TP; White DL; Rasko JEJ; Wong JJ; Clark SJ
    Epigenetics Chromatin; 2018 May; 11(1):24. PubMed ID: 29807544
    [TBL] [Abstract][Full Text] [Related]  

  • 3. The SEQC2 epigenomics quality control (EpiQC) study.
    Foox J; Nordlund J; Lalancette C; Gong T; Lacey M; Lent S; Langhorst BW; Ponnaluri VKC; Williams L; Padmanabhan KR; Cavalcante R; Lundmark A; Butler D; Mozsary C; Gurvitch J; Greally JM; Suzuki M; Menor M; Nasu M; Alonso A; Sheridan C; Scherer A; Bruinsma S; Golda G; Muszynska A; Łabaj PP; Campbell MA; Wos F; Raine A; Liljedahl U; Axelsson T; Wang C; Chen Z; Yang Z; Li J; Yang X; Wang H; Melnick A; Guo S; Blume A; Franke V; Ibanez de Caceres I; Rodriguez-Antolin C; Rosas R; Davis JW; Ishii J; Megherbi DB; Xiao W; Liao W; Xu J; Hong H; Ning B; Tong W; Akalin A; Wang Y; Deng Y; Mason CE
    Genome Biol; 2021 Dec; 22(1):332. PubMed ID: 34872606
    [TBL] [Abstract][Full Text] [Related]  

  • 4. Software updates in the Illumina HiSeq platform affect whole-genome bisulfite sequencing.
    Toh H; Shirane K; Miura F; Kubo N; Ichiyanagi K; Hayashi K; Saitou M; Suyama M; Ito T; Sasaki H
    BMC Genomics; 2017 Jan; 18(1):31. PubMed ID: 28056787
    [TBL] [Abstract][Full Text] [Related]  

  • 5. Generation of Whole-Genome Bisulfite Sequencing Libraries for Comprehensive DNA Methylome Analysis.
    Vargas-Landin DB; Pflüger J; Nguyen TV; Lister R
    Methods Mol Biol; 2024; 2842():383-390. PubMed ID: 39012606
    [TBL] [Abstract][Full Text] [Related]  

  • 6. Beyond the base pairs: comparative genome-wide DNA methylation profiling across sequencing technologies.
    Liu X; Pang Y; Shan J; Wang Y; Zheng Y; Xue Y; Zhou X; Wang W; Sun Y; Yan X; Shi J; Wang X; Gu H; Zhang F
    Brief Bioinform; 2024 Jul; 25(5):. PubMed ID: 39256199
    [TBL] [Abstract][Full Text] [Related]  

  • 7. Genome-Wide Analysis of DNA Methylation in Hematopoietic Cells: DNA Methylation Analysis by WGBS.
    Jeong M; Guzman AG; Goodell MA
    Methods Mol Biol; 2017; 1633():137-149. PubMed ID: 28735485
    [TBL] [Abstract][Full Text] [Related]  

  • 8. Low Input Genome-Wide DNA Methylation Analysis with Minimal Library Amplification.
    Au Yeung WK; Sasaki H
    Methods Mol Biol; 2022; 2509():233-250. PubMed ID: 35796967
    [TBL] [Abstract][Full Text] [Related]  

  • 9. Whole-Genome Bisulfite Sequencing for the Methylation Analysis of Insect Genomes.
    Gatzmann F; Lyko F
    Methods Mol Biol; 2019; 1858():141-156. PubMed ID: 30414116
    [TBL] [Abstract][Full Text] [Related]  

  • 10. Data quality of whole genome bisulfite sequencing on Illumina platforms.
    Raine A; Liljedahl U; Nordlund J
    PLoS One; 2018; 13(4):e0195972. PubMed ID: 29668744
    [TBL] [Abstract][Full Text] [Related]  

  • 11. Comparison of whole-genome bisulfite sequencing library preparation strategies identifies sources of biases affecting DNA methylation data.
    Olova N; Krueger F; Andrews S; Oxley D; Berrens RV; Branco MR; Reik W
    Genome Biol; 2018 Mar; 19(1):33. PubMed ID: 29544553
    [TBL] [Abstract][Full Text] [Related]  

  • 12. A comparison of existing global DNA methylation assays to low-coverage whole-genome bisulfite sequencing for epidemiological studies.
    Crary-Dooley FK; Tam ME; Dunaway KW; Hertz-Picciotto I; Schmidt RJ; LaSalle JM
    Epigenetics; 2017 Mar; 12(3):206-214. PubMed ID: 28055307
    [TBL] [Abstract][Full Text] [Related]  

  • 13. An information-theoretic approach to the modeling and analysis of whole-genome bisulfite sequencing data.
    Jenkinson G; Abante J; Feinberg AP; Goutsias J
    BMC Bioinformatics; 2018 Mar; 19(1):87. PubMed ID: 29514626
    [TBL] [Abstract][Full Text] [Related]  

  • 14. Beadchip technology to detect DNA methylation in mouse faithfully recapitulates whole-genome bisulfite sequencing.
    Martin EM; Grimm SA; Xu Z; Taylor JA; Wade PA
    Epigenomics; 2023 Feb; 15(3):115-129. PubMed ID: 37020391
    [No Abstract]   [Full Text] [Related]  

  • 15. DMAP2: A Pipeline for Analysis of Whole-Genome-Scale DNA Methylation Sequencing Data.
    Stockwell PA; Rodger EJ; Gimenez G; Morison IM; Chatterjee A
    Curr Protoc; 2024 Sep; 4(9):e70003. PubMed ID: 39258384
    [TBL] [Abstract][Full Text] [Related]  

  • 16. Studying DNA Methylation Genome-Wide by Bisulfite Sequencing from Low Amounts of DNA in Mammals.
    Bender A; Al Adhami H; Dahlet T; Weber M
    Methods Mol Biol; 2021; 2214():207-220. PubMed ID: 32944912
    [TBL] [Abstract][Full Text] [Related]  

  • 17. Generation of Whole Genome Bisulfite Sequencing Libraries from Very Low DNA Input.
    Weichenhan D; Imbusch CD; Wang Q; Brors B; Plass C
    Methods Mol Biol; 2019; 1956():229-248. PubMed ID: 30779037
    [TBL] [Abstract][Full Text] [Related]  

  • 18. High density DNA methylation array with single CpG site resolution.
    Bibikova M; Barnes B; Tsan C; Ho V; Klotzle B; Le JM; Delano D; Zhang L; Schroth GP; Gunderson KL; Fan JB; Shen R
    Genomics; 2011 Oct; 98(4):288-95. PubMed ID: 21839163
    [TBL] [Abstract][Full Text] [Related]  

  • 19. Approaches for the Analysis and Interpretation of Whole-Genome Bisulfite Sequencing Data.
    Stuart T; Buckberry S; Nguyen TV; Lister R
    Methods Mol Biol; 2024; 2842():391-403. PubMed ID: 39012607
    [TBL] [Abstract][Full Text] [Related]  

  • 20. Estimating Global Methylation and Erasure Using Low-Coverage Whole-Genome Bisulfite Sequencing (WGBS ).
    Ortega-Recalde O; Peat JR; Bond DM; Hore TA
    Methods Mol Biol; 2021; 2272():29-44. PubMed ID: 34009607
    [TBL] [Abstract][Full Text] [Related]  

    [Next]    [New Search]
    of 12.